RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SYNCQ9H7C4 482 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 MVB12BQ9H7P6 319 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 MAP6D1Q9H9H5 199 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 FBRSL1Q9HCM7 1045 aaKnown RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 SLC6A13Q9NSD5 602 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 POT1Q9NUX5 634 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 EHD2Q9NZN4 543 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 CARD8Q9Y2G2 431 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 RABGAP1Q9Y3P9 1069 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.31□□□□□ -1.56
LSM5-209ENST00000468872 SLC4A4Q9Y6R1 1079 aa5.31□□□□□ -1.56
LSM5-209ENST00000468872 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 PTGES3LE9PB15 166 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 ATG13O75143 517 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 CLDN7O95471 211 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 CDAP32320 146 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 ME1P48163 572 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 PIP4K2AP48426 406 aaPredicted RBP5.3□□□□□ -1.56
LSM5-209ENST00000468872 CREB5Q02930 508 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 CUL4AQ13619 759 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 FGFBP1Q14512 234 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 DPCR1Q3MIW9 517 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 LEXMQ3ZCV2 418 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 CPLX2Q6PUV4 134 aaKnown RBP5.3□□□□□ -1.56
LSM5-209ENST00000468872 CRELD2Q6UXH1 353 aaPredicted RBP5.3□□□□□ -1.56
LSM5-209ENST00000468872 NEK9Q8TD19 979 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 RNF183Q96D59 192 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 FTOQ9C0B1 505 aaKnown RBP eCLIP5.3□□□□□ -1.56
LSM5-209ENST00000468872 LHPPQ9H008 270 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 CCDC68Q9H2F9 335 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 ABI3Q9P2A4 366 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 ADD3Q9UEY8 706 aaKnown RBP5.3□□□□□ -1.56
LSM5-209ENST00000468872 NRBP1Q9UHY1 535 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 HAO1Q9UJM8 370 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 FAM96BQ9Y3D0 163 aa5.3□□□□□ -1.56
LSM5-209ENST00000468872 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 TYW5A2RUC4 315 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 TTC36A6NLP5 189 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 EIF3CLB5ME19 914 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 USP17L23D6RBM5 183 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 VILLO15195 856 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 GJB3O75712 270 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 MT-CYBP00156 380 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 PORP16435 677 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 CDH2P19022 906 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 ITGAXP20702 1163 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 PPARGP37231 505 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 GARSP41250 739 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 NLRP5P59047 1200 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 MC1RQ01726 317 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 CSTF3Q12996 717 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 MTX1Q13505 466 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 CAPSQ13938 189 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 COL28A1Q2UY09 1125 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 KLHL35Q6PF15 583 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 TSSK4Q6SA08 328 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 NOXA1Q86UR1 476 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 ARFGAP1Q8N6T3 406 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 ZNF548Q8NEK5 533 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 GJC3Q8NFK1 279 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 CEP76Q8TAP6 659 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 SCFD2Q8WU76 684 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 FAM120BQ96EK7 910 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 MMABQ96EY8 250 aaPredicted RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 ZFYVE19Q96K21 471 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 NUDT16L1Q9BRJ7 211 aaKnown RBP5.29□□□□□ -1.56
LSM5-209ENST00000468872 MXRA8Q9BRK3 442 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 TRMOQ9BU70 441 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 TKTL2Q9H0I9 626 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 ASAH2Q9NR71 780 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 SMYD2Q9NRG4 433 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 PLK2Q9NYY3 685 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 CLIC5Q9NZA1 410 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 HS3ST3B1Q9Y662 390 aa5.29□□□□□ -1.56
LSM5-209ENST00000468872 A0A1W2PRG0 241 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 hCG_1807616A0A1W2PRN6 198 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 CD8B2A6NJW9 211 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 STMND1H3BQB6 276 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 BCAT2O15382 392 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 SEC14L5O43304 696 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 FIBPO43427 364 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 KLK8O60259 260 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ATP2C2O75185 946 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 OAZ2O95190 189 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 MYZAPP0CAP1 466 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 PSG1P11464 419 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 CCKBRP32239 447 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 DCTDP32321 178 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ACTN2P35609 894 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 GOLGA8DPQ0D2H9 430 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 ACVR2BQ13705 512 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 INPP5JQ15735 1006 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 DUSP28Q4G0W2 176 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 PLEKHO1Q53GL0 409 aaPredicted RBP5.28□□□□□ -1.56
LSM5-209ENST00000468872 PRAMEF19Q5SWL8 479 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 RUSC1-AS1Q66K80 236 aa5.28□□□□□ -1.56
LSM5-209ENST00000468872 CES5AQ6NT32 575 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms