RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CUZD1Q86UP6 607 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 CEP97Q8IW35 865 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 C7orf31Q8N865 590 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 HDAC11Q96DB2 347 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 SGIP1Q9BQI5 828 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 MUC13Q9H3R2 512 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 STAP1Q9ULZ2 295 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 MAGED2Q9UNF1 606 aaPredicted RBP19.86■□□□□ 0.77
SDF4-205ENST00000465727 SCAF8Q9UPN6 1271 aaKnown RBP19.86■□□□□ 0.77
SDF4-205ENST00000465727 TCAF1Q9Y4C2 921 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 NME7Q9Y5B8 376 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 EVPLQ92817 2033 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 HBP1O60381 514 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 JUNBP17275 347 aaPredicted RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 HOXD12P35452 270 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 CCNYL2Q5T2Q4 361 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 MINDY1Q8N5J2 469 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 OR6B3Q8NGW1 331 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 PPP1R10Q96QC0 940 aaKnown RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 SLC9A7Q96T83 725 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 SLX1AQ9BQ83 275 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 TRMOQ9BU70 441 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 SEZ6LQ9BYH1 1024 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 PICK1Q9NRD5 415 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 RIC8BQ9NVN3 520 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 OAZ3Q9UMX2 235 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 NDUFAF1Q9Y375 327 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 TTC24A2A3L6 582 aaPredicted RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 ACOX3O15254 700 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 XPOTO43592 962 aaKnown RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 IPO13O94829 963 aaKnown RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 NFKB1P19838 968 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 ATP1A4Q13733 1029 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 PPP1R3AQ16821 1122 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 LY6KQ17RY6 165 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 PCID2Q5JVF3 399 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 OTUD1Q5VV17 481 aaPredicted RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 USP51Q70EK9 711 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 FRA10AC1Q70Z53 315 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 CPNE9Q8IYJ1 553 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 LEMD2Q8NC56 503 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 TRPV3Q8NET8 790 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 RAB2BQ8WUD1 216 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 TRAPPC12Q8WVT3 735 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 NPY6RQ99463 290 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 MUC3BQ9H195 1237 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 GPN2Q9H9Y4 310 aaPredicted RBP19.85■□□□□ 0.77
SDF4-205ENST00000465727 DERAQ9Y315 318 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 FIS1Q9Y3D6 152 aa19.85■□□□□ 0.77
SDF4-205ENST00000465727 NME4O00746 187 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 BCL10O95999 233 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 TPH1P17752 444 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 ERCC2P18074 760 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 ARF4P18085 180 aaPredicted RBP19.84■□□□□ 0.77
SDF4-205ENST00000465727 HCAR3P49019 387 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 POU4F1Q01851 419 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 FAM83EQ2M2I3 478 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 DCAF15Q66K64 600 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 LARP4Q71RC2 724 aaKnown RBP eCLIP19.84■□□□□ 0.772e-17■■■□□ 18.2
SDF4-205ENST00000465727 TP53INP2Q8IXH6 220 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 CRYBG2Q8N1P7 616 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 LRRC52Q8N7C0 313 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 HEXDCQ8WVB3 486 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 FAM149B1Q96BN6 582 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 NRBF2Q96F24 287 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 ATAD3AQ9NVI7 634 aa19.84■□□□□ 0.77
SDF4-205ENST00000465727 TRNAU1APQ9NX07 287 aaKnown RBP19.84■□□□□ 0.77
SDF4-205ENST00000465727 KPNA4O00629 521 aaPredicted RBP19.83■□□□□ 0.77
SDF4-205ENST00000465727 CLPXO76031 633 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 ADORA2BP29275 332 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 TMED10P49755 219 aaKnown RBP19.83■□□□□ 0.77
SDF4-205ENST00000465727 TRAF2Q12933 501 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 ZNF460Q14592 562 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 SNX17Q15036 470 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 CYBRD1Q53TN4 286 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 TECRLQ5HYJ1 363 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 PKN3Q6P5Z2 889 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 ZNF773Q6PK81 442 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 SPPL2CQ8IUH8 684 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 SLC22A9Q8IVM8 553 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 KLHDC8BQ8IXV7 354 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 CMTR2Q8IYT2 770 aaKnown RBP19.83■□□□□ 0.77
SDF4-205ENST00000465727 ADGRG5Q8IZF4 528 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 FBXL20Q96IG2 436 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 CPB2Q96IY4 423 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 APOL2Q9BQE5 337 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 SFMBT1Q9UHJ3 866 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 FAM32AQ9Y421 112 aaKnown RBP19.83■□□□□ 0.77
SDF4-205ENST00000465727 TRIM17Q9Y577 477 aa19.83■□□□□ 0.77
SDF4-205ENST00000465727 H0YAE9 185 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 DYNC1LI2O43237 492 aaPredicted RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 ZNF182P17025 639 aaPredicted RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 FUT4P22083 530 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 GNL1P36915 607 aaPredicted RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 CD151P48509 253 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 PGGT1BP53609 377 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 SLC12A2P55011 1212 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 RPS3AP61247 264 aaKnown RBP19.83■□□□□ 0.76
SDF4-205ENST00000465727 FOXM1Q08050 763 aa19.83■□□□□ 0.76
SDF4-205ENST00000465727 EGFLAMQ63HQ2 1017 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms