RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	EBF3	Q9H4W6	596 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	LRRC19	Q9H756	370 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	BRD9	Q9H8M2	597 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	TNFRSF12A	Q9NP84	129 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	ARHGEF4	Q9NR80	690 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	TRMT1	Q9NXH9	659 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	GTSE1	Q9NYZ3	720 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	REV1	Q9UBZ9	1251 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	AMFR	Q9UKV5	643 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	INTS6	Q9UL03	887 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	VANGL2	Q9ULK5	521 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	CLEC4E	Q9ULY5	219 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	HYOU1	Q9Y4L1	999 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	SNX10	Q9Y5X0	201 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	RAD54B	Q9Y620	910 aa		5.77	□□□□□ -1.49
PTPN12-209	ENST00000460731	hCG_1818297	A0A087WSY0	165 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SYNJ2BP-COX16	A0A087WUM0	186 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SPECC1L-ADORA2A	F8WAN1	911 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	PI4K2B	G5E9Z4	385 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731		K7ESM1	405 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	MAN2B1	O00754	1011 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	NARS	O43776	548 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SPOP	O43791	374 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	KIF5C	O60282	957 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	TULP3	O75386	442 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	LUC7L3	O95232	432 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	FTCD	O95954	541 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CD160	O95971	181 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	MOCS2	O96007	188 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CYBB	P04839	570 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	IRF1	P10914	325 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.76	□□□□□ -1.49	2e-6	■■■□□ 18
PTPN12-209	ENST00000460731	GOT1	P17174	413 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ERCC2	P18074	760 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	EPHB2	P29323	1055 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	HLA-F	P30511	346 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	GRIA2	P42262	883 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	TNFRSF4	P43489	277 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	NR2C2	P49116	596 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CDH6	P55285	790 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	PCBP3	P57721	371 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZXDA	P98168	799 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SLC20A2	Q08357	652 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ADCY2	Q08462	1091 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SLC10A2	Q12908	348 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	LAPTM5	Q13571	262 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	RPS6KA1	Q15418	735 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SMTNL2	Q2TAL5	461 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	PARP15	Q460N3	678 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	HSF5	Q4G112	596 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	TFDP3	Q5H9I0	405 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	FSCB	Q5H9T9	825 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	TMEM215	Q68D42	235 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	MFSD7	Q6UXD7	560 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	BMP8A	Q7Z5Y6	402 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZSCAN30	Q86W11	494 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CHSY1	Q86X52	802 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ARHGAP12	Q8IWW6	846 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	YAF2	Q8IY57	180 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CFAP52	Q8N1V2	620 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	SYNPO	Q8N3V7	929 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	RASGEF1C	Q8N431	466 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	PLD5	Q8N7P1	536 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	KCTD6	Q8NC69	237 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	WFDC5	Q8TCV5	224 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	EDA	Q92838	391 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	VOPP1	Q96AW1	172 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CLDN23	Q96B33	292 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CRELD1	Q96HD1	420 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	RBM41	Q96IZ5	413 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	RPRD1A	Q96P16	312 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	OLFM3	Q96PB7	478 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ALS2CR12	Q96Q35	445 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	WDR24	Q96S15	920 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	NELL2	Q99435	816 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	BBS2	Q9BXC9	721 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	MAGEH1	Q9H213	219 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	DHX35	Q9H5Z1	703 aa	Known RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	CATSPERB	Q9H7T0	1116 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZWILCH	Q9H900	591 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	ETNK2	Q9NVF9	386 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	GPATCH2L	Q9NWQ4	482 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	MPP6	Q9NZW5	540 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	COX16	Q9P0S2	106 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	AK5	Q9Y6K8	562 aa		5.76	□□□□□ -1.49
PTPN12-209	ENST00000460731	COL4A3	Q01955	1670 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	LRRD1	A4D1F6	860 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	TMEM110-MUSTN1	A8MSY1	372 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731		K7EQS6	105 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	EEF2K	O00418	725 aa	Known RBP	5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	SCAMP3	O14828	347 aa	Known RBP	5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	NPC1	O15118	1278 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	NCAM2	O15394	837 aa		5.75	□□□□□ -1.49
PTPN12-209	ENST00000460731	SUV39H1	O43463	412 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms