RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ERCC2P18074 760 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 TGM2P21980 687 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 HCAR3P49019 387 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 PFN3P60673 137 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 SERINC3Q13530 473 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 CYTH1Q15438 398 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 INO80DQ53TQ3 878 aaPredicted RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 CDCP2Q5VXM1 449 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 LRRC69Q6ZNQ3 347 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 NIPA2Q8N8Q9 360 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 CENPTQ96BT3 561 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 CELF6Q96J87 481 aaKnown RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 LENG8Q96PV6 779 aaPredicted RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 NHEJ1Q9H9Q4 299 aaPredicted RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 SP110Q9HB58 689 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
TREX1-203ENST00000456089 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 PMS2P1A4D2B8 440 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 NEMP2A6NFY4 417 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 H3BM21 787 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 J3KR12 359 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 USP12O75317 370 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 PAPOLAP51003 745 aaKnown RBP13.05□□□□□ -0.32
TREX1-203ENST00000456089 THOP1P52888 689 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 GABREP78334 506 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 PRRT3Q5FWE3 981 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 PERM1Q5SV97 790 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 EFL1Q7Z2Z2 1120 aaKnown RBP13.05□□□□□ -0.32
TREX1-203ENST00000456089 LZTR1Q8N653 840 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 PAF1Q8N7H5 531 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 FAM174AQ8TBP5 190 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 MAPK15Q8TD08 544 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 CXorf40AQ8TE69 158 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 FGF11Q92914 225 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 OSBPL1AQ9BXW6 950 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 ABCG4Q9H172 646 aa13.05□□□□□ -0.32
TREX1-203ENST00000456089 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
TREX1-203ENST00000456089 APOBEC3BQ9UH17 382 aaKnown RBP13.05□□□□□ -0.32
TREX1-203ENST00000456089 MGAQ8IWI9 3026 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 MUSKO15146 869 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 RRP8O43159 456 aaKnown RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 PALMO75781 387 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 TM7SF2O76062 418 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 RARAP10276 462 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 XPAP23025 273 aaPredicted RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 IL1R2P27930 398 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 GJC1P36383 396 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 RGRP47804 291 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 IRF4Q15306 451 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 DPYSL2Q16555 572 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 TBC1D25Q3MII6 688 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 CFAP58Q5T655 872 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 FAXCQ5TGI0 409 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 ZCCHC8Q6NZY4 707 aaKnown RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 ZSWIM9Q86XI8 627 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 FAM181AQ8N9Y4 354 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 TP53I13Q8NBR0 393 aaPredicted RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 KCTD6Q8NC69 237 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 DENND6BQ8NEG7 585 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 SNIP1Q8TAD8 396 aaKnown RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 FCRL3Q96P31 734 aaPredicted RBP13.04□□□□□ -0.32
TREX1-203ENST00000456089 DEPDC7Q96QD5 511 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 CHP1Q99653 195 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 LRRC61Q9BV99 259 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 DUSP23Q9BVJ7 150 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 SLC39A8Q9C0K1 460 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 CLPBQ9H078 707 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 PRORYQ9H606 182 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 LRRC19Q9H756 370 aa13.04□□□□□ -0.32
TREX1-203ENST00000456089 GCN1Q92616 2671 aaKnown RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 A0A1W2PNU3 283 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 KRT7P08729 469 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SERPINB6P35237 376 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 ACTN2P35609 894 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 DUSP3P51452 185 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 CDH6P55285 790 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 GRM3Q14832 879 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 ODF2Q5BJF6 829 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 C3orf38Q5JPI3 329 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 KCTD16Q68DU8 428 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 ARHGAP36Q6ZRI8 547 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 CYP4V2Q6ZWL3 525 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 POLNQ7Z5Q5 900 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 CAMK1DQ8IU85 385 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 MAP7D3Q8IWC1 876 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SPACA3Q8IXA5 215 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 TP53INP2Q8IXH6 220 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms