RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ARRDC2Q8TBH0 407 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 CREB3L4Q8TEY5 395 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 KTI12Q96EK9 354 aaPredicted RBP2.24□□□□□ -2.05
LRCH3-209ENST00000452660 TNIP3Q96KP6 325 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 YME1L1Q96TA2 773 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 ACAD9Q9H845 621 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 C17orf75Q9HAS0 396 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 CYSLTR2Q9NS75 346 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 DDX43Q9NXZ2 648 aaKnown RBP2.24□□□□□ -2.05
LRCH3-209ENST00000452660 C1RLQ9NZP8 487 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 NLKQ9UBE8 527 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 SLC9A2Q9UBY0 812 aa2.24□□□□□ -2.05
LRCH3-209ENST00000452660 NOTCH2Q04721 2471 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 PMS2P5A8MQ11 134 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 LGALS16A8MUM7 142 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 CAPN9O14815 690 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 TNFRSF6BO95407 300 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 ADAP00813 363 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 DDX5P17844 614 aaKnown RBP2.23□□□□□ -2.05
LRCH3-209ENST00000452660 AZU1P20160 251 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 MMP14P50281 582 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 TERF1P54274 439 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 SEC61BP60468 96 aaKnown RBP2.23□□□□□ -2.05
LRCH3-209ENST00000452660 SREBF2Q12772 1141 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 PICALMQ13492 652 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 SLC35E4Q6ICL7 350 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 FAAP20Q6NZ36 180 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 PRSS45Q7RTY3 260 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 DSG4Q86SJ6 1040 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 ZNF527Q8NB42 609 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 ADAD2Q8NCV1 583 aaKnown RBP2.23□□□□□ -2.05
LRCH3-209ENST00000452660 RASSF8Q8NHQ8 419 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 C3orf49Q96BT1 292 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 CDCA5Q96FF9 252 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 OBP2BQ9NPH6 170 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 TMEM30AQ9NV96 361 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 HCFC1R1Q9NWW0 138 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 C2orf42Q9NWW7 574 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 NFE2L3Q9Y4A8 694 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 PCDHGB5Q9Y5G0 923 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 RNF215Q9Y6U7 377 aa2.23□□□□□ -2.05
LRCH3-209ENST00000452660 CC2D2AQ9P2K1 1620 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 A0A0U1RQF3 1178 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 PLRG1O43660 514 aaKnown RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 ZIC3O60481 467 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 NDUFS7O75251 213 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 MYL3P08590 195 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 NBPF7P0C2Y1 421 aaPredicted RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 PCNAP12004 261 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 CDH1P12830 882 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 SRD5A1P18405 259 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 ITGAXP20702 1163 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 ALDH4A1P30038 563 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 FMO5P49326 533 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 LUMP51884 338 aaPredicted RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 EEF1A1P68104 462 aaKnown RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 NEDD9Q14511 834 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 EFNB3Q15768 340 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 PFKFB4Q16877 469 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 AP5B1Q2VPB7 878 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 ZNF876PQ49A33 203 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 KCNT1Q5JUK3 1230 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 EEF1A1P5Q5VTE0 462 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 DENND1BQ6P3S1 775 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 IL20RBQ6UXL0 311 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 KMT5CQ86Y97 462 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 CHERPQ8IWX8 916 aaKnown RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 GHDCQ8N2G8 530 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 KLHDC9Q8NEP7 349 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 SCRN2Q96FV2 425 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 MASTLQ96GX5 879 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 TRAPPC9Q96Q05 1148 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 TWSG1Q9GZX9 223 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 TTC12Q9H892 705 aaPredicted RBP2.22□□□□□ -2.05
LRCH3-209ENST00000452660 PLEKHA2Q9HB19 425 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 TAAR2Q9P1P5 351 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 CDC14AQ9UNH5 594 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 AGRNO00468 2067 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 NISCHQ9Y2I1 1504 aa2.22□□□□□ -2.05
LRCH3-209ENST00000452660 CBY3A6NI87 242 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 H0Y3Z8 333 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 BLOC1S5-TXNDC5H3BN57 136 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 CHRM4P08173 479 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 TFPIP10646 304 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 HLA-DOBP13765 273 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 RRM1P23921 792 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 CST5P28325 142 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-209ENST00000452660 HNF1BP35680 557 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 CLCN3P51790 818 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 NR1H2P55055 460 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 HDAC4P56524 1084 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 RELQ04864 619 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-209ENST00000452660 IRAK1BP1Q5VVH5 260 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 LCTLQ6UWM7 567 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 GFRALQ6UXV0 394 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 GTSCR1Q86UQ5 136 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 OR10V1Q8NGI7 309 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 HSPH1Q92598 858 aa2.21□□□□□ -2.06
LRCH3-209ENST00000452660 NOX4Q9NPH5 578 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms