RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 C11orf63Q6NUN7 778 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RWDD4Q6NW29 188 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RFWD3Q6PCD5 774 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 C1orf228Q6PIY5 440 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SEZ6L2Q6UXD5 910 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 PEX26Q7Z412 305 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 BNIPLQ7Z465 357 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MAP7D3Q8IWC1 876 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RHOT1Q8IXI2 618 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ADGRG2Q8IZP9 1017 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 CCDC185Q8N715 623 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 KCTD6Q8NC69 237 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HJURPQ8NCD3 748 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RIN3Q8TB24 985 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MGARPQ8TDB4 240 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HSPH1Q92598 858 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 GATA6Q92908 595 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SHDQ96IW2 340 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HIC2Q96JB3 615 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 LRRC3BQ96PB8 259 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SNRNP25Q9BV90 132 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 CATSPERBQ9H7T0 1116 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 TRIM10Q9UDY6 481 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MUTYHQ9UIF7 546 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 STOML2Q9UJZ1 356 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 VANGL2Q9ULK5 521 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 FZD10Q9ULW2 581 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ANGPTL3Q9Y5C1 460 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 PCDHGB3Q9Y5G1 929 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HS3ST4Q9Y661 456 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ALG6Q9Y672 507 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 DENND4CQ5VZ89 1909 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM221BA6H8Z2 402 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 E9PAM4 449 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PLOD2O00469 737 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 HOXC11O43248 304 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PSTPIP1O43586 416 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 DCXO43602 365 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 NARSO43776 548 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PLOD3O60568 738 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PALMO75781 387 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC4A1P02730 911 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 KRT1P04264 644 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 APODP05090 189 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CYP17A1P05093 508 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RHOCP08134 193 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ALADP13716 330 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TYRP14679 529 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 EPHB2P29323 1055 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC6A4P31645 630 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 L1CAMP32004 1257 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 HTR7P34969 479 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RXRGP48443 463 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PEX5P50542 639 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CDH4P55283 916 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CDH6P55285 790 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PRKCQQ04759 706 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TNK2Q07912 1038 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SCAPQ12770 1279 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 GRSF1Q12849 480 aaKnown RBP eCLIP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PRKG2Q13237 762 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF177Q13360 481 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CDH18Q13634 790 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 AUHQ13825 339 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SEMA3AQ14563 771 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PDK2Q15119 407 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 MLF2Q15773 248 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SMTNL2Q2TAL5 461 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC44A4Q53GD3 710 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RAB6CQ53S08 254 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PPP6R3Q5H9R7 873 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 KCNT1Q5JUK3 1230 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 MPP7Q5T2T1 576 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PIK3R6Q5UE93 754 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 NADSYN1Q6IA69 706 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 GRAMD4Q6IC98 578 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 FBXL22Q6P050 247 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TPRG1Q6ZUI0 275 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF765Q7L2R6 523 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RALGPS2Q86X27 583 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 MFN1Q8IWA4 741 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM217AQ8IXS0 508 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CFAP52Q8N1V2 620 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CARNMT1Q8N4J0 409 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 UBL4BQ8N7F7 174 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 LINC00469Q8N7U9 141 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 NAT16Q8N8M0 369 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TRIM58Q8NG06 486 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM3CQ92520 227 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms