RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 KCTD13Q8WZ19 329 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PRCCQ92733 491 aaPredicted RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 AP2A1O95782 977 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 NUDT17P0C025 328 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SPAM1P38567 509 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CRTC3Q6UUV7 619 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SH3RF2Q8TEC5 729 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 WFIKKN2Q8TEU8 576 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 DIS3LQ8TF46 1054 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 LINGO1Q96FE5 620 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PWWP2AQ96N64 755 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 FERD3LQ96RJ6 166 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 HEPHQ9BQS7 1158 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 BCO2Q9BYV7 579 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 RHOBTB2Q9BYZ6 727 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TNKS2Q9H2K2 1166 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CAAP1Q9H8G2 361 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CROTQ9UKG9 612 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PCDHB1Q9Y5F3 818 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 FCHO1O14526 889 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PPEF2O14830 753 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 INSIG1O15503 277 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 S100A3P33764 101 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 B4GALNT2Q8NHY0 566 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TRPC4APQ8TEL6 797 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 CLEC4CQ8WTT0 213 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 MTFMTQ96DP5 389 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 ASF1AQ9Y294 204 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 CD48P09326 243 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TLX1P31314 330 aaPredicted RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 HNRNPDQ14103 355 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 ZCCHC8Q6NZY4 707 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 FAM43BQ6ZT52 329 aaPredicted RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 STYXQ8WUJ0 223 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 NTAN1Q96AB6 310 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 RHOJQ9H4E5 214 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 RAD21L1Q9H4I0 556 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 LBPP18428 481 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 GRSF1Q12849 480 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPL28-202ENST00000426763 RIN3Q8TB24 985 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SNX15Q9NRS6 342 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 PSME2Q9UL46 239 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 SNX10Q9Y5X0 201 aa13.94□□□□□ -0.18
RPL28-202ENST00000426763 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
RPL28-202ENST00000426763 PRMT5O14744 637 aaPredicted RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 SH3BGRLO75368 114 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 ZNF865P0CJ78 1059 aaPredicted RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 FSHRP23945 695 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 PTPN4P29074 926 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 TMEM132CQ8N3T6 1108 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 PTPRHQ9HD43 1115 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 GCATO75600 419 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 ASLP04424 464 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NQO1P15559 274 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 HSPA13P48723 471 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NOVP48745 357 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 ZBTB17Q13105 803 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 IRF5Q13568 498 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 ACE2Q9BYF1 805 aaPredicted RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 PHACTR1Q9C0D0 580 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 SDCBP2Q9H190 292 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 IMPAD1Q9NX62 359 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 SPIDRQ14159 915 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 PIWIL4Q7Z3Z4 852 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 OR14C36Q8NHC7 312 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 ASZ1Q8WWH4 475 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 SLC25A23Q9BV35 468 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 CLDND1Q9NY35 253 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 URADA6NGE7 173 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 MRASO14807 208 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NTSP30990 170 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 TBL3Q12788 808 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 CSTF3Q12996 717 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 FRG1Q14331 258 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 CERS6Q6ZMG9 384 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 RIPOR1Q6ZS17 1223 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NIPA2Q8N8Q9 360 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 KCNK4Q9NYG8 393 aa13.93□□□□□ -0.18
RPL28-202ENST00000426763 NDRG2Q9UN36 371 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
RPL28-202ENST00000426763 ISM1B1AKI9 464 aa13.92□□□□□ -0.18
RPL28-202ENST00000426763 COX7A2P14406 83 aa13.92□□□□□ -0.18
RPL28-202ENST00000426763 ZNF23P17027 643 aa13.92□□□□□ -0.18
RPL28-202ENST00000426763 CACNG1Q06432 222 aa13.92□□□□□ -0.18
RPL28-202ENST00000426763 TMEM110Q86TL2 294 aa13.92□□□□□ -0.18
RPL28-202ENST00000426763 COLGALT2Q8IYK4 626 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms