RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 CLPBQ9H078 707 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 TNMDQ9H2S6 317 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 RMI1Q9H9A7 625 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 FBXO4Q9UKT5 387 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 BLOC1S6Q9UL45 172 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 LZTS1Q9Y250 596 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 RIPOR2Q9Y4F9 1068 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SLC4A4Q9Y6R1 1079 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CAPN7Q9Y6W3 813 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ITSN2Q9NZM3 1697 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 KDM6BO15054 1643 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 MED14O60244 1454 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 PLA2R1Q13018 1463 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 GRIN2BQ13224 1484 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ABCC10Q5T3U5 1492 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 PRAG1Q86YV5 1406 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMEM272A0A1B0GTI8 110 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ERICH2A1L162 156 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 GOLGA6L4A6NEF3 574 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM90A20PA6NIJ5 464 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ACOT8O14734 319 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 STRNO43815 780 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 NBNO60934 754 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM155BO75949 473 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 NEURL1O76050 574 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 METTL18O95568 372 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 IFNA2P01563 188 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 WNT1P04628 370 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 VEGFAP15692 232 aaPredicted RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SKIV2L2P42285 1042 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ENTPD1P49961 510 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 PRKAA2P54646 552 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 RHAGQ02094 409 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 POSTNQ15063 836 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 STX1AQ16623 288 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 PLK5Q496M5 336 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 CTXN3Q4LDR2 81 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 KLHL10Q6JEL2 608 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 HMBOX1Q6NT76 420 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 AAGABQ6PD74 315 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 CWC27Q6UX04 472 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 RSRC2Q7L4I2 434 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ARHGAP22Q7Z5H3 698 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM114A1Q8IWE2 563 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SCN4BQ8IWT1 228 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 RNF168Q8IYW5 571 aaPredicted RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 VPS52Q8N1B4 723 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SLC25A41Q8N5S1 370 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIM58Q8NG06 486 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM110DQ8TAY7 271 aaPredicted RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SPPL3Q8TCT6 385 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 NCSTNQ92542 709 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 IP6K1Q92551 441 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 P3H4Q92791 437 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SPDL1Q96EA4 605 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 KTI12Q96EK9 354 aaPredicted RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 MED30Q96HR3 178 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ANKRD27Q96NW4 1050 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ISCA1Q9BUE6 129 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 CARD6Q9BX69 1037 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 TWSG1Q9GZX9 223 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 MAF1Q9H063 256 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 BICC1Q9H694 974 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 VCPKMTQ9H867 229 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 CHODLQ9H9P2 273 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 KIF9Q9HAQ2 790 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 NOD2Q9HC29 1040 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 PTPRHQ9HD43 1115 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SPAG4Q9NPE6 437 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 RASSF1Q9NS23 344 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 UTP6Q9NYH9 597 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 KLQ9UEF7 1012 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 SWAP70Q9UH65 585 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 GGA2Q9UJY4 613 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 CORO1CQ9ULV4 474 aaPredicted RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 DHDHQ9UQ10 334 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 DERAQ9Y315 318 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 DNMT1P26358 1616 aaKnown RBP3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 WDR62O43379 1518 aa3.54□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM135BQ49AJ0 1406 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 ADGRL3Q9HAR2 1447 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 KIF24Q5T7B8 1368 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 SYNRGQ9UMZ2 1314 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIP12Q14669 1992 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 RIMBP3CA6NJZ7 1639 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 RIMBP3BA6NNM3 1639 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 RIMBP3Q9UFD9 1639 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 A0A0G2JK05 382 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NPIPB13A6NJU9 1138 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 SRRM3A6NNA2 597 aaPredicted RBP3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 USP27XA6NNY8 438 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NPIPB5A8MRT5 1133 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 BECN2A8MW95 431 aa3.53□□□□□ -1.84
SDCBPP3-201ENST00000419629 NPIPB4C9JG80 1138 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms