RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SOCS2O14508 198 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 PRKACGP22612 351 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ATICP31939 592 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 CDH5P33151 784 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 OR1G1P47890 313 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 WNT3AP56704 352 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 MTPNP58546 118 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TWF1Q12792 350 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 CCL14Q16627 93 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLC26A9Q7LBE3 791 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 GALNT10Q86SR1 603 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 HEATR4Q86WZ0 1026 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 HS3ST5Q8IZT8 346 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 LRRC39Q96DD0 335 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 OLFM1Q99784 485 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 FRMD8P1Q9BZ68 369 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLC39A8Q9C0K1 460 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 CD274Q9NZQ7 290 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 BCAP29Q9UHQ4 241 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 MYRFQ9Y2G1 1151 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 COL4A5P29400 1685 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 A0A0J9YYE9 177 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 H3BNX3 289 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 PIP5K1BO14986 540 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 GRID2O43424 1007 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 AP2A1O95782 977 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 HLA-DQB2P05538 268 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLC35E2BP0CK96 405 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SMIM10L2AP0DMW4 78 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SMIM10L2BP0DMW5 78 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 GABRB3P28472 473 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 CCNG1P51959 295 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 KPNA1P52294 538 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 TBCCQ15814 346 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 UAP1L1Q3KQV9 507 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 C14orf80Q86SX3 495 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TRIM74Q86UV6 250 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TRIM73Q86UV7 250 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 RAVER1Q8IY67 606 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 MYOCQ99972 504 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TSPYL2Q9H2G4 693 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 UXTQ9UBK9 157 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 IPO11Q9UI26 975 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ANGPTL3Q9Y5C1 460 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SIPA1L1O43166 1804 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 E5RI56 91 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 PDHXO00330 501 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 PAGE1O75459 146 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 DIRAS1O95057 198 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 LRATO95237 230 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 IL7RP16871 459 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 IL10P22301 178 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 AGTR2P50052 363 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLC18A1P54219 525 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ARHGAP1Q07960 439 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 NIPAL4Q0D2K0 466 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ZNF235Q14590 738 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TAF12Q16514 161 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 MGAT5BQ3V5L5 792 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLC39A12Q504Y0 691 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SH3D19Q5HYK7 790 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 FKBP1CQ5VVH2 108 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 TMEM110Q86TL2 294 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ZC3HC1Q86WB0 502 aaKnown RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 CNTD1Q8N815 330 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 FNDC5Q8NAU1 212 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 KBTBD7Q8WVZ9 684 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SDCCAG3Q96C92 435 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SPATA17Q96L03 361 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 C3orf30Q96M34 536 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 C17orf80Q9BSJ5 609 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 FAM192AQ9GZU8 254 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 ITM2CQ9NQX7 267 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 OXSMQ9NWU1 459 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 DNAJC28Q9NX36 388 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 MARCH4Q9P2E8 410 aaPredicted RBP8.37□□□□□ -1.07
SNX13-201ENST00000409076 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 COMMD3-BMI1R4GMX3 469 aa8.37□□□□□ -1.07
SNX13-201ENST00000409076 XIRP2A4UGR9 3374 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 A8MU76 341 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 BTN3A1O00481 513 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 TLR5O60602 858 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SNX2O60749 519 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 CNTN5O94779 1100 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 GSRP00390 522 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ASLP04424 464 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SNRPB2P08579 225 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 ELK4P28324 431 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 NR2C2P49116 596 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ARSDP51689 593 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms