RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MARCH4Q9P2E8 410 aaPredicted RBP11.77□□□□□ -0.52
SKA3-203ENST00000400018 ZCWPW2A0A1B0GU75 182 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 MTSS1O43312 755 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 LATS1O95835 1130 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 ADH1CP00326 375 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 MAGEA6P43360 314 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 GEMP55040 296 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 FCHO2Q0JRZ9 810 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
SKA3-203ENST00000400018 HTR4Q13639 388 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 ZNF234Q14588 700 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 TTC39BQ5VTQ0 682 aaPredicted RBP11.77□□□□□ -0.53
SKA3-203ENST00000400018 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 RETSATQ6NUM9 610 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 STK40Q8N2I9 435 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 GIMAP7Q8NHV1 300 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 PTPRN2Q92932 1015 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 MIEF2Q96C03 454 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 KLHL32Q96NJ5 620 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 VAT1Q99536 393 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 BFARQ9NZS9 450 aa11.77□□□□□ -0.53
SKA3-203ENST00000400018 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
SKA3-203ENST00000400018 NUP210Q8TEM1 1887 aaPredicted RBP11.77□□□□□ -0.53
SKA3-203ENST00000400018 ARNTLO00327 626 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 ANXA9O76027 345 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 CLDN7O95471 211 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 TUBBP07437 444 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 PAX7P23759 505 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 EPHB1P54762 984 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 IRX4P78413 519 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 KIAA1211LQ6NV74 962 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 NCEH1Q6PIU2 408 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 LYSMD3Q7Z3D4 306 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 MCUQ8NE86 351 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 SUSD6Q92537 303 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 HDAC10Q969S8 669 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 MOCOSQ96EN8 888 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 COQ6Q9Y2Z9 468 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 AAR2Q9Y312 384 aaKnown RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 H0YHG0 523 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 SIN3BO75182 1162 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 KAT7O95251 611 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 NFATC1O95644 943 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 SEMA3AQ14563 771 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 TRMT10CQ7L0Y3 403 aaKnown RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 CMC1Q7Z7K0 106 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 MMAAQ8IVH4 418 aaKnown RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 OR4K2Q8NGD2 314 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 TRIB3Q96RU7 358 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 NDNQ99608 321 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 TMBIM4Q9HC24 238 aa11.76□□□□□ -0.53
SKA3-203ENST00000400018 FBXO6Q9NRD1 293 aaPredicted RBP11.76□□□□□ -0.53
SKA3-203ENST00000400018 HMX2A2RU54 273 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 NPIPB15A6NHN6 443 aaPredicted RBP11.75□□□□□ -0.53
SKA3-203ENST00000400018 SUN1O94901 812 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 EGFP01133 1207 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 EPHX1P07099 455 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 MPP2Q14168 576 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 MPP7Q5T2T1 576 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 SERPINA13PQ6UXR4 307 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 CHPFQ8IZ52 775 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 OR2AP1Q8NGE2 309 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 OR13J1Q8NGT2 312 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 FRS2Q8WU20 508 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 RUBCNQ92622 972 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 ZNF358Q9NW07 568 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 THG1LQ9NWX6 298 aaKnown RBP11.75□□□□□ -0.53
SKA3-203ENST00000400018 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 ANKRD12Q6UB98 2062 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
SKA3-203ENST00000400018 LDB2O43679 373 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 GABRB3P28472 473 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 QPCTQ16769 361 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 PTCRAQ6ISU1 281 aaPredicted RBP11.75□□□□□ -0.53
SKA3-203ENST00000400018 RTL10Q7L3V2 364 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 SERAC1Q96JX3 654 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 NUDCD1Q96RS6 583 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 SELENOSQ9BQE4 189 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 XAB2Q9HCS7 855 aaKnown RBP11.75□□□□□ -0.53
SKA3-203ENST00000400018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
SKA3-203ENST00000400018 CA14Q9ULX7 337 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 CRYL1Q9Y2S2 319 aa11.75□□□□□ -0.53
SKA3-203ENST00000400018 LOC285095A0A1B0GVY8 99 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 ANKRD66B4E2M5 251 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 SLC9A3R1O14745 358 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms