RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SIRT5Q9NXA8 310 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 GDE1Q9NZC3 331 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 RNF181Q9P0P0 153 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 CRNNQ9UBG3 495 aaPredicted RBP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 HEY2Q9UBP5 337 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 UPB1Q9UBR1 384 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 LAMP5Q9UJQ1 280 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 LEF1Q9UJU2 399 aaPredicted RBP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 CCNL1Q9UK58 526 aaPredicted RBP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 PLAGL1Q9UM63 463 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 STX8Q9UNK0 236 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 RPH3AQ9Y2J0 694 aaPredicted RBP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 FAM96BQ9Y3D0 163 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 CMAHPQ9Y471 501 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 NFS1Q9Y697 457 aa2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 ZNF644Q9H582 1327 aaPredicted RBP2.16□□□□□ -2.06
HMGN2P39-201ENST00000398005 CLRN2A0PK11 232 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 A1L4Q6 167 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SH3D21A4FU49 640 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 OR6C68A6NDL8 312 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 OOEPA6NGQ2 149 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ERICH4A6NGS2 130 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 KDM4EB2RXH2 506 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 GPR89AB7ZAQ6 455 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 E7ENX8 843 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 IFNL4K9M1U5 179 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CES2O00748 559 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 IKBKBO14920 756 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CLIC2O15247 247 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 EIF3DO15371 548 aaKnown RBP eCLIP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SPRY2O43597 315 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HCRTR2O43614 444 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PLRG1O43660 514 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SLC25A17O43808 307 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 TSC22D2O75157 780 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PMPCBO75439 489 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CRCPO75575 148 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PALMO75781 387 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ZWINTO95229 277 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CELF2O95319 508 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SIX3O95343 332 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 GPANK1O95872 356 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 IL1AP01583 271 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 TFP02787 698 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ERBB2P04626 1255 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 RLN1P04808 185 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ALPPP05187 535 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HEXAP06865 529 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 C8AP07357 584 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ZFYP08048 801 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 VIMP08670 466 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 FAM58BPP0C7Q3 252 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 GPR89BP0CG08 455 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ALPPL2P10696 532 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PDHBP11177 359 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CREB1P16220 341 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ZNF182P17025 639 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ZNF28P17035 718 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HOXB9P17482 250 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 TNFRSF1AP19438 455 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ANXA7P20073 488 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 EDN2P20800 178 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ACHEP22303 614 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 KELP23276 732 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 DNASE1P24855 282 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CASQ1P31415 396 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SLC8A1P32418 973 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PCGF2P35227 344 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 LIPAP38571 399 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CRKLP46109 303 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 GABRB2P47870 512 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SULT1E1P49888 294 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 AGTR2P50052 363 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HNMTP50135 292 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 BLKP51451 505 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SUOXP51687 545 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 JAK3P52333 1124 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 ARFIP1P53367 373 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PDE1AP54750 535 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SH3BGRP55822 239 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 KIAA1024LP59773 190 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SUMO2P61956 95 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 RPS7P62081 194 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 RAE1P78406 368 aaKnown RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 KCNJ10P78508 379 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 FAM189BP81408 668 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 SHC2P98077 582 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PRKCEQ02156 737 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 TAP2Q03519 686 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HGFACQ04756 655 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 DEUP1Q05D60 604 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CCDC15Q0P6D6 951 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 PPIGQ13427 754 aaKnown RBP eCLIP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 DNASE1L3Q13609 305 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 KRT33BQ14525 404 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 HLXQ14774 488 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 DRAP1Q14919 205 aaPredicted RBP2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 DLG2Q15700 870 aa2.15□□□□□ -2.07
HMGN2P39-201ENST00000398005 CSRP2Q16527 193 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms