RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IL22Q9GZX6 179 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SEMA6AQ9H2E6 1030 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 STAP1Q9ULZ2 295 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 DERAQ9Y315 318 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 DLX3O60479 287 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 DDHD2O94830 711 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SLC35E2BP0CK96 405 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 CD247P20963 164 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 CA8P35219 290 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 PTK2BQ14289 1009 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 FGD3Q5JSP0 725 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 MYO1HQ8N1T3 1032 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 PTCD2Q8WV60 388 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 ATP6V1E2Q96A05 226 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 PSD2Q9BQI7 771 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 MCMBPQ9BTE3 642 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 KATNBL1Q9H079 304 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 SEPT3Q9UH03 358 aa16.09■□□□□ 0.17
CHMP1A-201ENST00000397901 TCAF2A6NFQ2 919 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 ADRA1BP35368 520 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 CCNA1P78396 465 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 LRRC8EQ6NSJ5 796 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 CTU1Q7Z7A3 348 aaKnown RBP16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 OSTM1Q86WC4 334 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 CENPLQ8N0S6 344 aaPredicted RBP16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 TNIP2Q8NFZ5 429 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 PPTC7Q8NI37 304 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 USP33Q8TEY7 942 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 NPLQ9BXD5 320 aaPredicted RBP16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 CDHR5Q9HBB8 845 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 VTI1BQ9UEU0 232 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 ERVK-11Q9UQG0 969 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 SPO11Q9Y5K1 396 aa16.08■□□□□ 0.17
CHMP1A-201ENST00000397901 NUP205Q92621 2012 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 EIF3FO00303 357 aaPredicted RBP16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 ACOT8O14734 319 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 CSPG5O95196 566 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 FGFR3P22607 806 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 MPP1Q00013 466 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 GRIK4Q16099 956 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 DGKDQ16760 1214 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 DENND6AQ8IWF6 608 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 FAM47BQ8NA70 645 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 B3GALNT2Q8NCR0 500 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 RDH11Q8TC12 318 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 STYXQ8WUJ0 223 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 TANKQ92844 425 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 DUSP16Q9BY84 665 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 PCDHAC1Q9H158 963 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 RHOJQ9H4E5 214 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 RIC8BQ9NVN3 520 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 ANKRD6Q9Y2G4 727 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 RBMX2Q9Y388 322 aaKnown RBP16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 CORINQ9Y5Q5 1042 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 SCN4AP35499 1836 aa16.08■□□□□ 0.16
CHMP1A-201ENST00000397901 BPTFQ12830 3046 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 SHROOM3Q8TF72 1996 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 H3BRB1 525 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 PDHXO00330 501 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 NRP1O14786 923 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 TADA2AO75478 443 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 JCHAINP01591 159 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 NPY2RP49146 381 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 CTBP1Q13363 440 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 HERC3Q15034 1050 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 GPR107Q5VW38 600 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 SAPCD2Q86UD0 394 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 NXNL1Q96CM4 212 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 C16orf70Q9BSU1 422 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 C1orf50Q9BV19 199 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 EHD1Q9H4M9 534 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 GTSE1Q9NYZ3 720 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 TMEM9Q9P0T7 183 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 KLHL3Q9UH77 587 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC22A2O15244 555 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 HTRA2O43464 458 aaPredicted RBP16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 AHSGP02765 367 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 MAP3K7CLP57077 242 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 GALNT2Q10471 571 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC12A1Q13621 1099 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 FRG1Q14331 258 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 OXA1LQ15070 435 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 OTOP3Q7RTS5 596 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 CEP97Q8IW35 865 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 CELF6Q96J87 481 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 MED10Q9BTT4 135 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC45A1Q9Y2W3 748 aa16.07■□□□□ 0.16
CHMP1A-201ENST00000397901 COL1A2P08123 1366 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms