RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 HYOU1Q9Y4L1 999 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 SAR1BQ9Y6B6 198 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF462Q96JM2 2506 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 A0A1W2PNU3 283 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 IGLON5A6NGN9 336 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 K7ESM1 405 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 PSTPIP1O43586 416 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 URI1O94763 535 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 F9P00740 461 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 MPOP05164 745 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 ITGB7P26010 798 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 CTNNA2P26232 953 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 CTNNA1P35221 906 aaKnown RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 PCK1P35558 622 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 NEK3P51956 506 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 TLE3Q04726 772 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 ODF2Q5BJF6 829 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 LRRC73Q5JTD7 316 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 ZFYVE27Q5T4F4 411 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 PAPD7Q5XG87 772 aaKnown RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 STRADAQ7RTN6 431 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 NLRP14Q86W24 1093 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 CACTIN-AS1Q8N1I8 211 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 CCDC185Q8N715 623 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 FAM172AQ8WUF8 416 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 FGF11Q92914 225 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 NAF1Q96HR8 494 aaKnown RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 HES6Q96HZ4 224 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 FCRL3Q96P31 734 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 HEPHQ9BQS7 1158 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 TLR10Q9BXR5 811 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 ZDHHC6Q9H6R6 413 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 RRAGDQ9NQL2 400 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 HECAQ9UBI9 543 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 PACSIN2Q9UNF0 486 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-202ENST00000396828 HS3ST3A1Q9Y663 406 aa10.47□□□□□ -0.73
NEDD8-202ENST00000396828 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PIEZO2Q9H5I5 2752 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 SPTY2D1-AS1A0A0U1RR47 76 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 A6NNZ2 444 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 SCAMP1O15126 338 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PRPSAP2O60256 369 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 CSF2P04141 144 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 KRT7P08729 469 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 TGM2P21980 687 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 ADRA1BP35368 520 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RECQLP46063 649 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RWDD2BP57060 319 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RPS21P63220 83 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 E2F1Q01094 437 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 EIF2B5Q13144 721 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 TBC1D25Q3MII6 688 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 ATXN7L2Q5T6C5 722 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 LRRC38Q5VT99 294 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RETSATQ6NUM9 610 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 CRTC1Q6UUV9 634 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 ZNF783Q6ZMS7 281 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 LRRC69Q6ZNQ3 347 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 POLNQ7Z5Q5 900 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 SPACA3Q8IXA5 215 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RBFAQ8N0V3 343 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 RYBPQ8N488 228 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PCDH20Q8N6Y1 951 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 ARHGEF2Q92974 986 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PPP1R16AQ96I34 528 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 FEM1CQ96JP0 617 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PBKQ96KB5 322 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 UBL7Q96S82 380 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 OSBPL9Q96SU4 736 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 C1QTNF2Q9BXJ5 285 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 CEP44Q9C0F1 390 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 KLC2Q9H0B6 622 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 NOL6Q9H6R4 1146 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 NLGN3Q9NZ94 848 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PPARGC1AQ9UBK2 798 aaKnown RBP10.46□□□□□ -0.73
NEDD8-202ENST00000396828 OR12D3Q9UGF7 316 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 PCDHA3Q9Y5H8 950 aa10.46□□□□□ -0.73
NEDD8-202ENST00000396828 KIF26BQ2KJY2 2108 aa10.46□□□□□ -0.74
NEDD8-202ENST00000396828 BSNQ9UPA5 3926 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 RP1P56715 2156 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 C16orf96A6NNT2 1141 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CES2O00748 559 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 FANCGO15287 622 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 DDX3YO15523 660 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 RRP8O43159 456 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 AP1G1O43747 822 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 USP12O75317 370 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 LRCH4O75427 683 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 GCATO75600 419 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 LRIG2O94898 1065 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 UGT2B4P06133 528 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 NME1P15531 152 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 MIPP30301 263 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 GJC1P36383 396 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms