RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 OPRD1P41143 372 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 MAPK8P45983 427 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SLC18A1P54219 525 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 CNGA3Q16281 694 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 WFIKKN2Q8TEU8 576 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 NXPE3Q969Y0 559 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 ISL2Q96A47 359 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 ARL5AQ9Y689 179 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 INHBAP08476 426 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PSMC3P17980 439 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 GKP32189 559 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 NLRP9Q7RTR0 991 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 OR2A12Q8NGT7 310 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SORCS1Q8WY21 1168 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 CPNE1Q99829 537 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 KXD1Q9BQD3 176 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 C20orf96Q9NUD7 363 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PPIL1Q9Y3C6 166 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PIGNO95427 931 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 IGSF6O95976 241 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 GABRB3P28472 473 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 RPL26P61254 145 aaKnown RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 RUNX3Q13761 415 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 GRM2Q14416 872 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PTPRRQ15256 657 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 DLG2Q15700 870 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 HSP90AA5PQ58FG0 334 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 CARD16Q5EG05 197 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 NAIF1Q69YI7 327 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 TAOK1Q7L7X3 1001 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 CTAGE3PQ8IX95 158 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 TTC30BQ8N4P2 665 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 DENND1AQ8TEH3 1009 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SENP1Q9P0U3 644 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 HCN2Q9UL51 889 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 RPL26L1Q9UNX3 145 aaKnown RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CCDC78A2IDD5 438 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CNTFP26441 200 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 SLC8A1P32418 973 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CCNFP41002 786 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 MAGEA12P43365 314 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 GRIA4P48058 902 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 SERPINB9P50453 376 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ARSDP51689 593 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 SNRPD1P62314 119 aaKnown RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 TAF1AQ15573 450 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 BANPQ8N9N5 519 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 OR6K2Q8NGY2 324 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CYB5D2Q8WUJ1 264 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CDKL2Q92772 493 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 EID2BQ96D98 161 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ADGRE3Q9BY15 652 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 TRABDQ9H4I3 376 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ZFATQ9P243 1243 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ASLP04424 464 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 HTR4Q13639 388 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 GRTP1Q5TC63 336 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 LPCAT1Q8NF37 534 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 MDM1Q8TC05 714 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 NECTIN4Q96NY8 510 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 RBBP8Q99708 897 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 PPANQ9NQ55 473 aaKnown RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 PSD3Q9NYI0 1048 aa12.78□□□□□ -0.36
TRIM39-204ENST00000396548 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-204ENST00000396548 GRXCR2A6NFK2 248 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 TTC34A8MYJ7 566 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 VAPBO95292 243 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.36
TRIM39-204ENST00000396548 DLDP09622 509 aaKnown RBP12.77□□□□□ -0.36
TRIM39-204ENST00000396548 PIRTP0C851 137 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.36
TRIM39-204ENST00000396548 GJA4P35212 333 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.36
TRIM39-204ENST00000396548 LAMB3Q13751 1172 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 DPY19L3Q6ZPD9 716 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 GALNT7Q86SF2 657 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 KDM1BQ8NB78 822 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 C2CD4AQ8NCU7 369 aaPredicted RBP12.77□□□□□ -0.36
TRIM39-204ENST00000396548 SGSM3Q96HU1 749 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 MFSD1Q9H3U5 465 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 IARS2Q9NSE4 1012 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms