RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 GPS1Q13098 491 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 GALNT3Q14435 633 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 SPARCL1Q14515 664 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 KCTD11Q693B1 232 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
SMN2-203ENST00000380743 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 LPCAT1Q8NF37 534 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 FEM1CQ96JP0 617 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 FADS3Q9Y5Q0 445 aa12.74□□□□□ -0.37
SMN2-203ENST00000380743 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 FAM47DPA6NHR8 397 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 ANKRD66B4E2M5 251 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 AREL1O15033 823 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 SLC7A4O43246 635 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 USP12O75317 370 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RPP40O75818 363 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 AP2A1O95782 977 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 EPOP01588 193 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 CTPS1P17812 591 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 BCKDHBP21953 392 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 XPAP23025 273 aaPredicted RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 TERF1P54274 439 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RPL26P61254 145 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 FAM193AP78312 1265 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 TCF15Q12870 199 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 PTK6Q13882 451 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RANBP10Q6VN20 620 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 JAMLQ86YT9 394 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RAB7BQ96AH8 199 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RMDN1Q96DB5 314 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 PPP1R2P1Q96PQ5 205 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 APOL2Q9BQE5 337 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 FICDQ9BVA6 458 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 RPL26L1Q9UNX3 145 aaKnown RBP12.73□□□□□ -0.37
SMN2-203ENST00000380743 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
SMN2-203ENST00000380743 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3DA0A087WVF3 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3IA0A087WXS9 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3EA0A087X179 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3KA0A087X1G2 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 A0A0U1RQS6 177 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3FA6NER0 549 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 A8MX80 341 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3LB9A6J9 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 E7EVH7 732 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 RAD51CO43502 376 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 AP1G1O43747 822 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 SEMA4FO95754 770 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 NDST3O95803 873 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TRBC1P01850 177 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 APRTP07741 180 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 ALPIP09923 528 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3HP0C7X1 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 HNF1BP35680 557 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 MMP12P39900 470 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 CHRNA4P43681 627 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 SUOXP51687 545 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 EPHB1P54762 984 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 QPCTQ16769 361 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3GQ6DHY5 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3CQ6IPX1 549 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBC1D3Q8IZP1 549 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 MCCC1Q96RQ3 725 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
SMN2-203ENST00000380743 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 L2HGDHQ9H9P8 463 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
SMN2-203ENST00000380743 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms