RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CARTPTQ16568 116 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 PGS1Q32NB8 556 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 INTS11Q5TA45 600 aaKnown RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 SLC26A9Q7LBE3 791 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 KCNN1Q92952 543 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 C1orf50Q9BV19 199 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 DGCR6LQ9BY27 220 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 C2orf40Q9H1Z8 148 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 FZD8Q9H461 694 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CASS4Q9NQ75 786 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 RIC8BQ9NVN3 520 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CLASP2O75122 1294 aaKnown RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 ZBTB7AO95365 584 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CES1P23141 567 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CD68P34810 354 aaPredicted RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CAPGP40121 348 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 DNASE1L3Q13609 305 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 GEN1Q17RS7 908 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 EFCAB12Q6NXP0 572 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 NANOGNBQ7Z5D8 188 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF354CQ86Y25 554 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 ERO1BQ86YB8 467 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 FUNDC1Q8IVP5 155 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 EXT2Q93063 718 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 GPR78Q96P69 363 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 CSF3RQ99062 836 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 BEGAINQ9BUH8 593 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 SETD4Q9NVD3 440 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 ATAD3AQ9NVI7 634 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 GIN1Q9NXP7 522 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 SMPD3Q9NY59 655 aaPredicted RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 TMED5Q9Y3A6 229 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 WNT10BO00744 389 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 SYNCRIPO60506 623 aaKnown RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 CLPXO76031 633 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 PRKAA2P54646 552 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 STX1BP61266 288 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 RBP5P82980 135 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 PKDCCQ504Y2 493 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 CYBRD1Q53TN4 286 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 PIWIL4Q7Z3Z4 852 aaKnown RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 DNAJB14Q8TBM8 379 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 CENPIQ92674 756 aaPredicted RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 CENPNQ96H22 339 aaPredicted RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 MUS81Q96NY9 551 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 LHPPQ9H008 270 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 ING2Q9H160 280 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 CDHR5Q9HBB8 845 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 SARDHQ9UL12 918 aa15.96■□□□□ 0.14
CKAP4-201ENST00000378026 MTF2Q9Y483 593 aaPredicted RBP15.96■□□□□ 0.14
CKAP4-201ENST00000378026 NUP205Q92621 2012 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 IGKV6D-21A0A0A0MT36 114 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 AURKAO14965 403 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ACOX3O15254 700 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 YBX3P16989 372 aaKnown RBP eCLIP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 CASP2P42575 452 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 CCT8P50990 548 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 SLC12A2P55011 1212 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ATP6AP1Q15904 470 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 UTS2BQ765I0 119 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 OTOP3Q7RTS5 596 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 SEPT1Q8WYJ6 367 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 DUS3LQ96G46 650 aaKnown RBP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 C3orf30Q96M34 536 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 SNX25Q9H3E2 840 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 DSEQ9UL01 958 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF487B1APH4 448 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 M0QYT0 321 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 KPNA4O00629 521 aaPredicted RBP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 AQP9O43315 295 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 JCHAINP01591 159 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ERCC2P18074 760 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 RPS9P46781 194 aaKnown RBP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 APLP1P51693 650 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 CDH13P55290 713 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 MBTD1Q05BQ5 628 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 TBPL2Q6SJ96 375 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 CADM3Q8N126 398 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 SPATA22Q8NHS9 363 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 GABPB2Q8TAK5 448 aaPredicted RBP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 C11orf84Q9BUA3 381 aaPredicted RBP15.95■□□□□ 0.14
CKAP4-201ENST00000378026 SEZ6LQ9BYH1 1024 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ADAMTS10Q9H324 1103 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 KIAA1257Q9ULG3 409 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 TNFSF13BQ9Y275 285 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 CPQQ9Y646 472 aa15.95■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF638Q14966 1978 aaKnown RBP15.94■□□□□ 0.14
CKAP4-201ENST00000378026 NPHS1O60500 1241 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 CD151P48509 253 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 RABGGTBP53611 331 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 LAMC2Q13753 1193 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 ESRP1Q6NXG1 681 aaKnown RBP15.94■□□□□ 0.14
CKAP4-201ENST00000378026 CCDC80Q76M96 950 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 SCAIQ8N9R8 606 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 PCYOX1LQ8NBM8 494 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
CKAP4-201ENST00000378026 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms