RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 VPS4AQ9UN37 437 aa4.84□□□□□ -1.63
PMS1-202ENST00000374826 PCDHB2Q9Y5E7 798 aa4.84□□□□□ -1.63
PMS1-202ENST00000374826 RALGAPA2Q2PPJ7 1873 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 MYO7AQ13402 2215 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 RRHO14718 337 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 APOL1O14791 398 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CTAGE5O15320 804 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CBFA2T3O75081 653 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CNOT3O75175 753 aaKnown RBP4.83□□□□□ -1.64
PMS1-202ENST00000374826 EIF3JO75822 258 aaKnown RBP4.83□□□□□ -1.64
PMS1-202ENST00000374826 GGPS1O95749 300 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 GH1P01241 217 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 MYL3P08590 195 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 ZNF286BP0CG31 522 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CTSAP10619 480 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 XBP1P17861 261 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 ACLYP53396 1101 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 NANOS2P60321 138 aaKnown RBP4.83□□□□□ -1.64
PMS1-202ENST00000374826 SP4Q02446 784 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 ARHGAP1Q07960 439 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 TRIM29Q14134 588 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 DUSP28Q4G0W2 176 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CXCL17Q6UXB2 119 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 KIAA0408Q6ZU52 694 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 UBE2Q1Q7Z7E8 422 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 PIP4P1Q86T03 277 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 CCDC28AQ8IWP9 274 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 FAM184AQ8NB25 1140 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 ACRBPQ8NEB7 543 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 BICD2Q8TD16 824 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 AFG1LQ8WV93 481 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 INPP4AQ96PE3 977 aaPredicted RBP4.83□□□□□ -1.64
PMS1-202ENST00000374826 TBCBQ99426 244 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 LLPHQ9BRT6 129 aaKnown RBP4.83□□□□□ -1.64
PMS1-202ENST00000374826 GLT8D2Q9H1C3 349 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 C11orf49Q9H6J7 331 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 SH3GLB2Q9NR46 395 aa4.83□□□□□ -1.64
PMS1-202ENST00000374826 IGLV3-22A0A075B6J6 115 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 CCDC194A0A1B0GVG4 234 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 FAM86B1E9PN63 330 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 DDX39AO00148 427 aaKnown RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 PMM2O15305 246 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 FIBPO43427 364 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 STAM2O75886 525 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TDP2O95551 362 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 PLAUP00749 431 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 MMP1P03956 469 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 ASGR1P07306 291 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 MMP3P08254 477 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 FAM86B2P0C5J1 330 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 IDEP14735 1019 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 CST5P28325 142 aaPredicted RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 GJB2P29033 226 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 KRT2P35908 639 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 MCM2P49736 904 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 PSMC6P62333 389 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 HMGN5P82970 282 aaKnown RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 SRSF1Q07955 248 aaKnown RBP eCLIP4.82□□□□□ -1.64
PMS1-202ENST00000374826 BFSP2Q13515 415 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 STIM1Q13586 685 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 NONOQ15233 471 aaKnown RBP eCLIP4.82□□□□□ -1.64
PMS1-202ENST00000374826 CNGA3Q16281 694 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 LRRC26Q2I0M4 334 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TMEM196Q5HYL7 178 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 EARS2Q5JPH6 523 aaKnown RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 CCSAPQ6IQ19 270 aaPredicted RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 C9orf47Q6ZRZ4 202 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 PIK3AP1Q6ZUJ8 805 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 PLA2G4DQ86XP0 818 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 HSCBQ8IWL3 235 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 DIS3L2Q8IYB7 885 aaKnown RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TBCKQ8TEA7 893 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 IGFBPL1Q8WX77 278 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 CRYGNQ8WXF5 182 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 GJA10Q969M2 543 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 C8orf76Q96K31 380 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 SNX27Q96L92 541 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 FCRL5Q96RD9 977 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 MXRA8Q9BRK3 442 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 TM2D2Q9BX73 214 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 HEY2Q9UBP5 337 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 ZMYND8Q9ULU4 1186 aaPredicted RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 SMC3Q9UQE7 1217 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 HEMK1Q9Y5R4 338 aaPredicted RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 UBIAD1Q9Y5Z9 338 aa4.82□□□□□ -1.64
PMS1-202ENST00000374826 COL4A4P53420 1690 aaPredicted RBP4.82□□□□□ -1.64
PMS1-202ENST00000374826 BRWD1Q9NSI6 2320 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 PLXNA4Q9HCM2 1894 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 BTBD18B2RXH4 712 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 KIF28PB7ZC32 967 aa4.81□□□□□ -1.64
PMS1-202ENST00000374826 ZSCAN9O15535 394 aaPredicted RBP4.81□□□□□ -1.64
PMS1-202ENST00000374826 SLC37A4O43826 429 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms