RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PFKPQ01813 784 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 RING1Q06587 406 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 GPR17Q13304 367 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 CYLC2Q14093 348 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 PPM1LQ5SGD2 360 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 TMEM198Q66K66 360 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 IRGCQ6NXR0 463 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 RNF19BQ6ZMZ0 732 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ADGRG6Q86SQ4 1221 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 SETD3Q86TU7 594 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 CCDC126Q96EE4 140 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 SPATA17Q96L03 361 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 SEMA3CQ99985 751 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ZNF385DQ9H6B1 395 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 GTSE1Q9NYZ3 720 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 PCDHB7Q9Y5E2 793 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 MIA3Q5JRA6 1907 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 TRPC5OSA6NMA1 111 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 TMEM233B4DJY2 109 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 MAPKAPK2P49137 400 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 SLC14A2Q15849 920 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 SPNS2Q8IVW8 549 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 POLR1EQ9GZS1 481 aaKnown RBP29.1■■■□□ 2.25
SSBP3-204ENST00000371320 CCSER2Q9H7U1 834 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 VWA8A3KMH1 1905 aa29.1■■■□□ 2.25
SSBP3-204ENST00000371320 A0A1W2PQ45 241 aaPredicted RBP29.09■■■□□ 2.25
SSBP3-204ENST00000371320 A0A1W2PQY0 241 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 RBP1P09455 135 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 HNRNPLP14866 589 aaKnown RBP eCLIP29.09■■■□□ 2.253e-24■■■■■ 36.5
SSBP3-204ENST00000371320 C16orf89Q6UX73 402 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 RSPO2Q6UXX9 243 aaPredicted RBP29.09■■■□□ 2.25
SSBP3-204ENST00000371320 LRRC8DQ7L1W4 858 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 LDB1Q86U70 411 aaPredicted RBP29.09■■■□□ 2.25
SSBP3-204ENST00000371320 KYQ8NBH2 561 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 MYEOVQ96EZ4 313 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 IFT43Q96FT9 208 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 CYP4F12Q9HCS2 524 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 STARD7Q9NQZ5 370 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 SRRDQ9UH36 339 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 CORO1CQ9ULV4 474 aaPredicted RBP29.09■■■□□ 2.25
SSBP3-204ENST00000371320 KCTD3Q9Y597 815 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 LDB2O43679 373 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 S1PR4O95977 384 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 GATMP50440 423 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 NADSYN1Q6IA69 706 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 MARCH5Q9NX47 278 aa29.09■■■□□ 2.25
SSBP3-204ENST00000371320 A8MT66 165 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 ENPP3O14638 875 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 TLR5O60602 858 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 PRAMEF11O60813 436 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 GJB3O75712 270 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 IPO13O94829 963 aaKnown RBP29.08■■■□□ 2.25
SSBP3-204ENST00000371320 VNN2O95498 520 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 TACR2P21452 398 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 ZNF235Q14590 738 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 ACAP2Q15057 778 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 SLC43A3Q8NBI5 491 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 UBXN10Q96LJ8 280 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 CASD1Q96PB1 797 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 TSEN34Q9BSV6 310 aaKnown RBP29.08■■■□□ 2.25
SSBP3-204ENST00000371320 ELAC1Q9H777 363 aaKnown RBP29.08■■■□□ 2.25
SSBP3-204ENST00000371320 COMMD8Q9NX08 183 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 MARCH4Q9P2E8 410 aaPredicted RBP29.08■■■□□ 2.25
SSBP3-204ENST00000371320 OR51F1A6NGY5 319 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 KCNA5P22460 613 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 SLC11A1P49279 550 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 DUSP4Q13115 394 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 IZUMO2Q6UXV1 221 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 HIPK4Q8NE63 616 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 GIPC2Q8TF65 315 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 ANKRD49Q8WVL7 239 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 MARK4Q96L34 752 aa29.08■■■□□ 2.25
SSBP3-204ENST00000371320 BRCA2P51587 3418 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 HTTP42858 3142 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 KPNA1P52294 538 aaPredicted RBP29.07■■■□□ 2.24
SSBP3-204ENST00000371320 CDKN2DP55273 166 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 DSG1Q02413 1049 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 FUT10Q6P4F1 479 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 DHDDSQ86SQ9 333 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 DSELQ8IZU8 1212 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 EML4Q9HC35 981 aaKnown RBP29.07■■■□□ 2.24
SSBP3-204ENST00000371320 ZBTB26Q9HCK0 441 aa29.07■■■□□ 2.24
SSBP3-204ENST00000371320 PRPF19Q9UMS4 504 aaKnown RBP29.07■■■□□ 2.24
SSBP3-204ENST00000371320 A6NHS1 94 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 SELPP16109 830 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 HERC3Q15034 1050 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 UCMAQ8WVF2 138 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 FEM1CQ96JP0 617 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 MAELQ96JY0 434 aaKnown RBP29.06■■■□□ 2.24
SSBP3-204ENST00000371320 HCSTQ9UBK5 93 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 SDHDO14521 159 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 MUSKO15146 869 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 ZDHHC11BP0C7U3 371 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 HLA-DPA1P20036 260 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 KCNQ1P51787 676 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 SULT2A1Q06520 285 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 SMARCB1Q12824 385 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 RTP2Q5QGT7 225 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 LGI2Q8N0V4 545 aa29.06■■■□□ 2.24
SSBP3-204ENST00000371320 DBF4BQ8NFT6 615 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms