RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 POMKQ9H5K3 350 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TNFRSF12AQ9NP84 129 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 PKD2L2Q9NZM6 624 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 IFT80Q9P2H3 777 aaPredicted RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NME7Q9Y5B8 376 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 A0A087X1B8 175 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 INO80B-WBP1J3KQ70 363 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 FXYD1O00168 92 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 EI24O14681 340 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 EIF2S1P05198 315 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 GFAPP14136 432 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 ARSAP15289 507 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 GPX3P22352 226 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 RFC2P35250 354 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TKTL1P51854 596 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 GNA12Q03113 381 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TMEM132DQ14C87 1099 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TMEM132BQ14DG7 1078 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 SNX17Q15036 470 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NEDD8Q15843 81 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 SLC10A6Q3KNW5 377 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 LARP4Q71RC2 724 aaKnown RBP eCLIP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CEP97Q8IW35 865 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 C7orf31Q8N865 590 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 DNAAF3Q8N9W5 541 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 USP33Q8TEY7 942 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 SNX19Q92543 992 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CCDC138Q96M89 665 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 EML4Q9HC35 981 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CHRAC1Q9NRG0 131 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 RNF103-CHMP3A0A140T963 221 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TCRBV5S2A0A599 114 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CCDC78A2IDD5 438 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AP3B1O00203 1094 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 NRP1O14786 923 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CAPN15O75808 1086 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CLIC3O95833 236 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AHSGP02765 367 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 OXTRP30559 389 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 IDUAP35475 653 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AVPR1AP37288 418 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 RPS9P46781 194 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 GJA9P57773 515 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 FOXM1Q08050 763 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 SEPT6Q14141 434 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TECRLQ5HYJ1 363 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AGAP7PQ5VUJ5 663 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CUZD1Q86UP6 607 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 FAM131BQ86XD5 332 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TTC30BQ8N4P2 665 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 NETO2Q8NC67 525 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CCNYQ8ND76 341 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 OR9I1Q8NGQ6 314 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 HDAC10Q969S8 669 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CCDC126Q96EE4 140 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MAGED4Q96JG8 741 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 SLC39A3Q9BRY0 314 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TEX13BQ9BXU2 312 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MINDY3Q9H8M7 445 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 INTS10Q9NVR2 710 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 GMIPQ9P107 970 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AURKCQ9UQB9 309 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TMEM98Q9Y2Y6 226 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TSC2P49815 1807 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 FAM149AA5PLN7 773 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 KCNK1O00180 336 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ARPC2O15144 300 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 UGT2B4P06133 528 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MMP10P09238 476 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ALOX5P09917 674 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 HNRNPLP14866 589 aaKnown RBP eCLIP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 STMN1P16949 149 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AXLP30530 894 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MATKP42679 507 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 PGGT1BP53609 377 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CD300CQ08708 224 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 BST2Q10589 180 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ITGADQ13349 1161 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ZNF846Q147U1 533 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AMHR2Q16671 573 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 KYAT1Q16773 422 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 SLC25A52Q3SY17 297 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 COQ5Q5HYK3 327 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 LAYNQ6UX15 382 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 ACOT1Q86TX2 421 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TP53INP2Q8IXH6 220 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 DDIASQ8IXT1 998 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms