RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 DPP6P42658 865 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 NUDT2P50583 147 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 POU6F2P78424 691 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 OCA2Q04671 838 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 PRKCZQ05513 592 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SLC13A2Q13183 592 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 HERC3Q15034 1050 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 AMHR2Q16671 573 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 VWA5B1Q5TIE3 1220 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 RSBN1Q5VWQ0 802 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 BNC2Q6ZN30 1099 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 CHST15Q7LFX5 561 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SNX19Q92543 992 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 USP13Q92995 863 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 FERD3LQ96RJ6 166 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 CFHR5Q9BXR6 569 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MKRN2Q9H000 416 aaKnown RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 VPS28Q9UK41 221 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 TNFSF13BQ9Y275 285 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 A0A0X1KG70 313 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 SOCS2O14508 198 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 SHOXO15266 292 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 HDAC3O15379 428 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 MTSS1O43312 755 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 LIASO43766 372 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 BPGMP07738 259 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 MAPK4P31152 587 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CDH8P55286 799 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 NOMO3P69849 1222 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 KLF10Q13118 480 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 BFSP2Q13515 415 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 SELPLGQ14242 412 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 GRIK4Q16099 956 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 DUSP28Q4G0W2 176 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 NDUFAF5Q5TEU4 345 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ANKRD22Q5VYY1 191 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 NXNQ6DKJ4 435 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 HMBOX1Q6NT76 420 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 MON1BQ7L1V2 547 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 LINC01465Q8N7H1 131 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ZSCAN18Q8TBC5 510 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 RAB2BQ8WUD1 216 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CHAC2Q8WUX2 184 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 SLC44A1Q8WWI5 657 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 GLMNQ92990 594 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FAM49AQ9H0Q0 323 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 PDZD7Q9H5P4 517 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 TRIM39Q9HCM9 518 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CISHQ9NSE2 258 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 MOCS1Q9NZB8 636 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ATPIF1Q9UII2 106 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 LACTBL1A8MY62 500 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 MEN1O00255 615 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ZNF195O14628 629 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 NDUFS2O75306 463 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FAM155BO75949 473 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 SEC14L2O76054 403 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 STAG3L1P0CL83 205 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CKMT2P17540 419 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 RRM2P31350 389 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 GRIA1P42261 906 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 OR3A3P47888 321 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FCHO2Q0JRZ9 810 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CCL14Q16627 93 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 KIZQ2M2Z5 673 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ZNF699Q32M78 642 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 JADE1Q6IE81 842 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 DSELQ8IZU8 1212 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FAM109AQ8N4B1 249 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 LEMD2Q8NC56 503 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 FNIP1Q8TF40 1166 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 CITED4Q96RK1 184 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 EFHD1Q9BUP0 239 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 ABHD16BQ9H3Z7 469 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 RNF19AQ9NV58 838 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 PRMT7Q9NVM4 692 aaPredicted RBP11.93□□□□□ -0.5
RTN3-203ENST00000341307 DNAJC28Q9NX36 388 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
RTN3-203ENST00000341307 TRIM49D1C9J1S8 452 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms