RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 CNPPD1Q9BV87 410 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CISHQ9NSE2 258 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TBC1D30Q9Y2I9 924 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 H7C1W4 665 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 PLIN3O60664 434 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 C6orf222P0C671 652 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.367e-7■■□□□ 14.2
RAB11FIP1-202ENST00000330843 NAGLUP54802 743 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 NRG1Q02297 640 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ZNF543Q08ER8 600 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ALX1Q15699 326 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 AAGABQ6PD74 315 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CHST4Q8NCG5 386 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RAB21Q9UL25 225 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SLC12A8A0AV02 714 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ERVV-1B6SEH8 477 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 B3GAT3O94766 335 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 LRIG2O94898 1065 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MT-ND1P03886 318 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ZNF12P17014 697 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RBM20Q5T481 1227 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SCUBE3Q8IX30 993 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GPR65Q8IYL9 337 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 FNDC11Q9BVV2 318 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CDADC1Q9BWV3 514 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 FBXO21O94952 628 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 DNTTP04053 509 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 HTR3CQ8WXA8 447 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SLC39A3Q9BRY0 314 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MYH15Q9Y2K3 1946 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SMARCB1Q12824 385 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SSX6Q7RTT6 188 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CELF1Q92879 486 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RETREG1Q9H6L5 497 aa12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP1-202ENST00000330843 BTBD19C9JJ37 291 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MAGEB2O15479 319 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TUBG1P23258 451 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 OR1E1P30953 314 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SLC5A3P53794 718 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SSX3Q99909 188 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TUBG2Q9NRH3 451 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 DHX15O43143 795 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 AGMOQ6ZNB7 445 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 VAT1Q99536 393 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 H0YJX3 145 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.362e-38■■■■□ 20.8
RAB11FIP1-202ENST00000330843 HMGCRP04035 888 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 AQP1P29972 269 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 NAE1Q13564 534 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 COMTD1Q86VU5 262 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 RPL38P63173 70 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CDH17Q12864 832 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GLB1LQ6UWU2 654 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CHST7Q9NS84 486 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SLC28A2O43868 658 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 VNN2O95498 520 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CSN2P05814 226 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 LYNP07948 512 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CHRM5P08912 532 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 BCAT1P54687 386 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MARC1Q5VT66 337 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CYP4X1Q8N118 509 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 GALNT15Q8N3T1 639 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 VANGL1Q8TAA9 524 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ETNPPLQ8TBG4 499 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 NELL1Q92832 810 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 FATE1Q969F0 183 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 C12orf43Q96C57 262 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 ALG2Q9H553 416 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 SSX5O60225 188 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 MED24O75448 989 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 VDRP11473 427 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 HNRNPLP14866 589 aaKnown RBP eCLIP12.81□□□□□ -0.367e-16■■□□□ 11.8
RAB11FIP1-202ENST00000330843 HNF4AP41235 474 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 CTSKP43235 329 aa12.81□□□□□ -0.36
RAB11FIP1-202ENST00000330843 BAG6P46379 1132 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms