RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 EFCAB3Q8N7B9 438 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 ASCC1Q8N9N2 400 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 AFG1LQ8WV93 481 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 LRP6O75581 1613 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CLRN2A0PK11 232 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 FAM189A1O60320 539 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 BANF1O75531 89 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MLYCDO95822 493 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 STX4Q12846 297 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PTP4A2Q12974 167 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PLCL1Q15111 1095 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF470Q6ECI4 717 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 OR56A4Q8NGH8 313 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 KCTD4Q8WVF5 259 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 TOR4AQ9NXH8 423 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 HIST1H2AGP0C0S8 130 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 HIST1H2ADP20671 130 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IFNGR2P38484 337 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IDH3AP50213 366 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 ANXA11P50995 505 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SLC16A1P53985 500 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 RAB10P61026 200 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PRKCEQ02156 737 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 RELAQ04206 551 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CNTN1Q12860 1018 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MOGSQ13724 837 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 DUS1LQ6P1R4 473 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 HIST1H2AHQ96KK5 128 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 HIST1H2AJQ99878 128 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 H2AFJQ9BTM1 129 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MRPL9Q9BYD2 267 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PCDHB8Q9UN66 801 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 INTS1Q8N201 2190 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 POLRMTO00411 1230 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IFRD1O00458 451 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PLA2G6O60733 806 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 OR7A10O76100 309 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 FBXO21O94952 628 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CSF1RP07333 972 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 TCEA1P23193 301 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IL4RP24394 825 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MSX2P35548 267 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 TCF7P36402 384 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MAPKAPK2P49137 400 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SRP54P61011 504 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IL18R1Q13478 541 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 RALGPS1Q5JS13 557 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PLA2G4FQ68DD2 849 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 XRRA1Q6P2D8 792 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CBWD2Q8IUF1 395 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4X1Q8N118 509 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 RNASE11Q8TAA1 199 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 DNAJB14Q8TBM8 379 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 UNC93B1Q9H1C4 597 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 COQ10BQ9H8M1 238 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 MCUBQ9NWR8 336 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 AFF4Q9UHB7 1163 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 hCG_1818297A0A087WSY0 165 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 TBX1O43435 398 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 HMGCRP04035 888 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PSKH1P11801 424 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IDH2P48735 452 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 RGS7P49802 495 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 ALDH6A1Q02252 535 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 POU6F1Q14863 301 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 PDIA6Q15084 440 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 DCAF12L1Q5VU92 463 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 SUSD4Q5VX71 490 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 GALNT12Q8IXK2 581 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 IZUMO1Q8IYV9 350 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 EBNA1BP2Q99848 306 aaKnown RBP7.09□□□□□ -1.27
SMC1A-201ENST00000322213 BLOC1S4Q9NUP1 217 aa7.09□□□□□ -1.27
SMC1A-201ENST00000322213 FAM240BA0A1B0GVZ2 78 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 MPZL2O60487 215 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 PMPCBO75439 489 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 GLP2RO95838 553 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 ANGPTL1O95841 491 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 PRKCBP05771 671 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 ITGA2P17301 1181 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 POU1F1P28069 291 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 NPTX2P47972 431 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 AP3S2P59780 193 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 CLPPQ16740 277 aaPredicted RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 INTS11Q5TA45 600 aaKnown RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 KCNK18Q7Z418 384 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 LNX1Q8TBB1 728 aaPredicted RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 C12orf43Q96C57 262 aaKnown RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 FAM84BQ96KN1 310 aaPredicted RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 HGH1Q9BTY7 390 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 KCNH7Q9NS40 1196 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 QPCTLQ9NXS2 382 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 F5H6K3 240 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF197O14709 1029 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 KLF11O14901 512 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 HMGB3O15347 200 aaKnown RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 RPLP0P05388 317 aaKnown RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 RCVRNP35243 200 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms