RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ITGB7P26010 798 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SUOXP51687 545 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SESN2P58004 480 aaPredicted RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 DHX9Q08211 1270 aaKnown RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SIGLEC14Q08ET2 396 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 PDIA2Q13087 525 aaKnown RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 MSLNQ13421 630 aaPredicted RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 GALNT3Q14435 633 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 QPCTQ16769 361 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 FAM153CQ494X1 144 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 CFAP58Q5T655 872 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 GSPT2Q8IYD1 628 aaKnown RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SLC25A41Q8N5S1 370 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 LPCAT1Q8NF37 534 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 PJA1Q8NG27 643 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 HNRNPLLQ8WVV9 542 aaKnown RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 EDAQ92838 391 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 PPP1R16AQ96I34 528 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 NAT9Q9BTE0 207 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 FOXQ1Q9C009 403 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 IL22Q9GZX6 179 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 HACD3Q9P035 362 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
PRPF18-201ENST00000320054 TEX264Q9Y6I9 313 aa13.69□□□□□ -0.22
PRPF18-201ENST00000320054 A0A0J9YYE9 177 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 MAGEB16A2A368 324 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 IL1BP01584 269 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 TRBC1P01850 177 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 COL9A1P20849 921 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 ADRA1DP25100 572 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 NFKBIAP25963 317 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 MGAT1P26572 445 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 RPS9P46781 194 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 COPAP53621 1224 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 EPHB1P54762 984 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 RPS14P62263 151 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 SATB1Q01826 763 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 CERCAMQ5T4B2 595 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 ZNF776Q68DI1 518 aaPredicted RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 KIAA1211LQ6NV74 962 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 Q6ZS52 159 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 SYT13Q7L8C5 426 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 TMC3Q7Z5M5 1100 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 CCDC25Q86WR0 208 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 CCNJLQ8IV13 435 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 AGGF1Q8N302 714 aaeCLIP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 SCRN2Q96FV2 425 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 LYSMD1Q96S90 227 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 IER2Q9BTL4 223 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 HDAC8Q9BY41 377 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 TRABDQ9H4I3 376 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 MAGEE1Q9HCI5 957 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 SAYSD1Q9NPB0 183 aa13.68□□□□□ -0.22
PRPF18-201ENST00000320054 PIH1D1Q9NWS0 290 aaKnown RBP13.68□□□□□ -0.22
PRPF18-201ENST00000320054 TECTAO75443 2155 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 C16orf96A6NNT2 1141 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 UPK3BL1B0FP48 263 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 UPK3BL2E5RIL1 263 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 DCXO43602 365 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 TIMP2P16035 220 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-201ENST00000320054 TPH1P17752 444 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 C5AR1P21730 350 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 SLC8A1P32418 973 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 MAGEA4P43358 317 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 ZBTB16Q05516 673 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 CST6Q15828 149 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 CRY1Q16526 586 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 UGP2Q16851 508 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 PCID2Q5JVF3 399 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 PKN3Q6P5Z2 889 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 USP45Q70EL2 814 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 TRMT10CQ7L0Y3 403 aaKnown RBP13.67□□□□□ -0.22
PRPF18-201ENST00000320054 PARS2Q7L3T8 475 aaKnown RBP13.67□□□□□ -0.22
PRPF18-201ENST00000320054 ZBED8Q8IZ13 594 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 BRSK1Q8TDC3 778 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 ARRDC3Q96B67 414 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 STAMBPL1Q96FJ0 436 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 KIFC1Q9BW19 673 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
PRPF18-201ENST00000320054 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms