RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 RNF139Q8WU17 664 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ZBED3Q96IU2 234 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TBCBQ99426 244 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ARHGAP39Q9C0H5 1083 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CASS4Q9NQ75 786 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 VPS45Q9NRW7 570 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 DNAJB4Q9UDY4 337 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SNX10Q9Y5X0 201 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 DNAH12Q6ZR08 3092 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CROCCQ5TZA2 2017 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF831Q5JPB2 1677 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ASB14A6NK59 587 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FAM20BO75063 409 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 RHOBTB1O94844 696 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FADS2O95864 444 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ALDOAP04075 364 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MPOP05164 745 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 GSNP06396 782 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CTSHP09668 335 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ITGB6P18564 788 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 HOXD12P35452 270 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 APLP1P51693 650 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MAP3K7CLP57077 242 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 DEFA1P59665 94 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 DEFA3P59666 94 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PPIL2Q13356 520 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FRG1Q14331 258 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 NR6A1Q15406 480 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PPP1R26Q5T8A7 1209 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MPZL3Q6UWV2 235 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FAM126BQ8IXS8 530 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TMEM192Q8IY95 271 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CLIP4Q8N3C7 705 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 KCTD17Q8N5Z5 321 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SPATA22Q8NHS9 363 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SEPT1Q8WYJ6 367 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SLC45A3Q96JT2 553 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PEBP4Q96S96 227 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ELOVL4Q9GZR5 314 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TRMT13Q9NUP7 481 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CACNA2D2Q9NY47 1150 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 NENFQ9UMX5 172 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FARP1Q9Y4F1 1045 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 A0A0J9YYE9 177 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SLCO1B7G3V0H7 640 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 HTRA2O43464 458 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CCNKO75909 580 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ENDOD1O94919 500 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ABCB1P08183 1280 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MYL3P08590 195 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 AKAP5P24588 427 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ELK4P28324 431 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 GGT5P36269 586 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PRKAA2P54646 552 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 AASDHQ4L235 1098 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PDCD4Q53EL6 469 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 DEPDC1Q5TB30 811 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TWF2Q6IBS0 349 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 DUS1LQ6P1R4 473 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 LRRC8DQ7L1W4 858 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 OTOP3Q7RTS5 596 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SAMD3Q8N6K7 520 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CCDC185Q8N715 623 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 BEST2Q8NFU1 509 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CD99L2Q8TCZ2 262 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 UTP15Q8TED0 518 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 C17orf50Q8WW18 174 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SP110Q9HB58 689 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TRPV5Q9NQA5 729 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 VTI1BQ9UEU0 232 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 WDR37Q9Y2I8 494 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 COQ4Q9Y3A0 265 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ATRNL1Q5VV63 1379 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MKI67P46013 3256 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SMCHD1A6NHR9 2005 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SH3PXD2BA1X283 911 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FUOMA2VDF0 154 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PLOD2O00469 737 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SYNCRIPO60506 623 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 XYLBO75191 536 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 OXSR1O95747 527 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FTH1P02794 183 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PIK3CGP48736 1102 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 SLC6A3Q01959 620 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MERTKQ12866 999 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 NOGQ13253 232 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 KCNJ11Q14654 390 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 LAPTM4AQ15012 233 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PMF1Q6P1K2 205 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CHSY3Q70JA7 882 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 AKAP14Q86UN6 197 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 CUZD1Q86UP6 607 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 C12orf56Q8IXR9 622 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MARVELD2Q8N4S9 558 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PTGR2Q8N8N7 351 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms