RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IFT43Q96FT9 208 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 ADGRE3Q9BY15 652 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 PCDH12Q9NPG4 1184 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 GOLGA6AQ9NYA3 693 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 FADS3Q9Y5Q0 445 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 A0A0J9YYE9 177 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 ERI2A8K979 691 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 C10orf142B7Z368 130 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 H0Y858 1186 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 LILRB5O75023 590 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 AP2A1O95782 977 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 NDST3O95803 873 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 TRBC1P01850 177 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 PRKCGP05129 697 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 ITIH2P19823 946 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 VPS41P49754 854 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 EPHB1P54762 984 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 TCF15Q12870 199 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 GPS1Q13098 491 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 DNTTIP2Q5QJE6 756 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 SYDE1Q6ZW31 735 aaPredicted RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 PDCD7Q8N8D1 485 aaKnown RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 MNS1Q8NEH6 495 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 LPCAT1Q8NF37 534 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 PRSS33Q8NF86 280 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 MCCC1Q96RQ3 725 aaPredicted RBP16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 FSD1LQ9BXM9 530 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 USP34Q70CQ2 3546 aa16.72■□□□□ 0.27
CHCHD3-201ENST00000262570 NUMA1Q14980 2115 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 ANKRD36A6QL64 1941 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 VPS13AQ96RL7 3174 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 TTI1O43156 1089 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 PSMD3O43242 534 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 SEMA4FO95754 770 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 AGTP01019 485 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 ATXN1LP0C7T5 689 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 BCKDHBP21953 392 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 GRIA4P48058 902 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 BASP1P80723 227 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 ELP6Q0PNE2 266 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 SRSF5Q13243 272 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 PTK6Q13882 451 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 GALNT3Q14435 633 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 SLC1A5Q15758 541 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 QPCTQ16769 361 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 CCDC70Q6NSX1 233 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 SLC36A4Q6YBV0 504 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 JAMLQ86YT9 394 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 NDUFAF2Q8N183 169 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 OR2T34Q8NGX1 318 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 CCHCR1Q8TD31 782 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 RMDN1Q96DB5 314 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 GPR174Q9BXC1 333 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 LRRC40Q9H9A6 602 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 L2HGDHQ9H9P8 463 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 PREBQ9HCU5 417 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 GGT7Q9UJ14 662 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 ITM2BQ9Y287 266 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 DMDP11532 3685 aa16.71■□□□□ 0.27
CHCHD3-201ENST00000262570 EML5Q05BV3 1969 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3DA0A087WVF3 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3IA0A087WXS9 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3EA0A087X179 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3KA0A087X1G2 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3FA6NER0 549 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 FAM47DPA6NHR8 397 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 LRRC72A6NJI9 287 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3LB9A6J9 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TSPAN6O43657 245 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 SUN1O94901 812 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3HP0C7X1 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 HLA-DPA1P20036 260 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 NFKBIAP25963 317 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 MMP12P39900 470 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 FAM193AP78312 1265 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 OLIG2Q13516 323 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 SPARCL1Q14515 664 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3GQ6DHY5 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3CQ6IPX1 549 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 USP45Q70EL2 814 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 MAATS1Q7Z4T9 603 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 C11orf74Q86VG3 221 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 TBC1D3Q8IZP1 549 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 SMIM14Q96QK8 99 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 FICDQ9BVA6 458 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 ARNT2Q9HBZ2 717 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 B4GALT6Q9UBX8 382 aa16.7■□□□□ 0.26
CHCHD3-201ENST00000262570 CTAGE15A4D2H0 777 aa16.69■□□□□ 0.26
CHCHD3-201ENST00000262570 E7EVH7 732 aa16.69■□□□□ 0.26
CHCHD3-201ENST00000262570 NEMP1O14524 444 aa16.69■□□□□ 0.26
CHCHD3-201ENST00000262570 MAP3K13O43283 966 aa16.69■□□□□ 0.26
CHCHD3-201ENST00000262570 NDUFS2O75306 463 aa16.69■□□□□ 0.26
CHCHD3-201ENST00000262570 USP12O75317 370 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms