RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 PLXNB3Q9ULL4 1909 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 FAM170AA1A519 330 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 SIGLEC6O43699 453 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 GJB6O95452 261 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 CAPNS1P04632 268 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 KELP23276 732 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 PFN3P60673 137 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 AP1S1P61966 158 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 ZBED6P86452 979 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 DHX9Q08211 1270 aaKnown RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 PEX6Q13608 980 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 IQCB1Q15051 598 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 ELOCQ15369 112 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 UGP2Q16851 508 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 PPP6R3Q5H9R7 873 aaPredicted RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 LVRNQ6Q4G3 990 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 FSTL5Q8N475 847 aaPredicted RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 OR6C4Q8NGE1 309 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
PDZD11-201ENST00000239666 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
PDZD11-201ENST00000239666 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 MYO1FO00160 1098 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 AQP9O43315 295 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 TPM1P09493 284 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 ALPIP09923 528 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 ERCC2P18074 760 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 CES1P23141 567 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 MIPP30301 263 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 PAPOLAP51003 745 aaKnown RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 RTP5Q14D33 572 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 LRRC14Q15048 493 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 RAB6CQ53S08 254 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 TMCO3Q6UWJ1 677 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 SRLQ86TD4 932 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 MAP7D3Q8IWC1 876 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 OR6K2Q8NGY2 324 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 NAT6Q93015 286 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 DEPDC7Q96QD5 511 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 KLF6Q99612 283 aaPredicted RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 MYOCQ99972 504 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 RAB6CQ9H0N0 254 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 RCOR3Q9P2K3 495 aaPredicted RBP12.85□□□□□ -0.35
PDZD11-201ENST00000239666 PCSK1NQ9UHG2 260 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 CAPN11Q9UMQ6 739 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
PDZD11-201ENST00000239666 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 ARID1BQ8NFD5 2236 aaPredicted RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 POM121BA6NF01 834 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■□□□ 12.7
PDZD11-201ENST00000239666 ZW10O43264 779 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 SDC3O75056 442 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 ANXA6P08133 673 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 TIMP2P16035 220 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 ACTN2P35609 894 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 CDH6P55285 790 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 CLDN2P57739 230 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 FANCCQ00597 558 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 PPARDQ03181 441 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 TRIM14Q14142 442 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 FZD2Q14332 565 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 CYTH1Q15438 398 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 ATXN7L2Q5T6C5 722 aaPredicted RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 HES3Q5TGS1 186 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 MACC1Q6ZN28 852 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 DCBLD1Q8N8Z6 715 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 PSKH2Q96QS6 385 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 SNRNP25Q9BV90 132 aaKnown RBP12.84□□□□□ -0.35
PDZD11-201ENST00000239666 SLC39A8Q9C0K1 460 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 FZD3Q9NPG1 666 aa12.84□□□□□ -0.35
PDZD11-201ENST00000239666 ZNHIT6Q9NWK9 470 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms