RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 LPCAT1Q8NF37 534 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 SPATA13Q96N96 652 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 VAT1Q99536 393 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 FERMT1Q9BQL6 677 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 COQ6Q9Y2Z9 468 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
SYPL1-201ENST00000011473 IGLON5A6NGN9 336 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 WNT9AO14904 365 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 SLC31A1O15431 190 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 PIRTP0C851 137 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 RALGPS1Q5JS13 557 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 LAIR1Q6GTX8 287 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 CYP2U1Q7Z449 544 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 ACTRT1Q8TDG2 376 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 PIH1D2Q8WWB5 315 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 FOXJ1Q92949 421 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 GBA3Q9H227 469 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 PREBQ9HCU5 417 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TRHDEQ9UKU6 1024 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 SPEGQ15772 3267 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 NPIPB15A6NHN6 443 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 PROB1E7EW31 1015 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 STK10O94804 968 aaKnown RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 METTL18O95568 372 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 PAK4O96013 591 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 CES1P23141 567 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 MMP12P39900 470 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 MPLP40238 635 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 EPHB1P54762 984 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 FGL2Q14314 439 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 DENND2CQ68D51 928 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TTC27Q6P3X3 843 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 CREG2Q8IUH2 290 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 IPMKQ8NFU5 416 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 RAB7BQ96AH8 199 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 FCRL5Q96RD9 977 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 ORAI3Q9BRQ5 295 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 NCDNQ9UBB6 729 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 TTC7AQ9ULT0 858 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-201ENST00000011473 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
SYPL1-201ENST00000011473 C5orf60A6NFR6 353 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 LATO43561 262 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 AP1G1O43747 822 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 LHCGRP22888 699 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 CASQ1P31415 396 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 HNF1BP35680 557 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 CHRNA4P43681 627 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 WNT3AP56704 352 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 POLR2LP62875 67 aaKnown RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SPEM2Q0P670 501 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 RALGDSQ12967 914 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 ERAP2Q6P179 960 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 ARHGEF18Q6ZSZ5 1173 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 HORMAD1Q86X24 394 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 HCAR2Q8TDS4 363 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 APOL2Q9BQE5 337 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 FAM153AQ9UHL3 310 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 GMEB2Q9UKD1 530 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 PILRBQ9UKJ0 227 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 A0A1W2PPC4 97 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 H0Y8X5 98 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 PDE2AO00408 941 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 CES2O00748 559 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TSPAN6O43657 245 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 OPHN1O60890 802 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 USP12O75317 370 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 EPN2O95208 641 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 ITGAVP06756 1048 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 RETP07949 1114 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 LIG3P49916 1009 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TERF1P54274 439 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 CDK18Q07002 472 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SPARCL1Q14515 664 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TMEM259Q4ZIN3 620 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms