RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Lman2lP59481 347 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gpatch4Q3TFK5 415 aaKnown RBP16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fam131bQ3TY60 332 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Heatr9Q5QNV8 569 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Q6GQU0 248 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 AtminQ6P9S1 818 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Paqr9Q6TCG2 375 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Smoc1Q8BLY1 463 aaKnown RBP16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slc41a2Q8BYR8 573 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slco4a1Q8K078 723 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pih1d1Q9CQJ2 290 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gucy1a3Q9ERL9 691 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trpc7Q9WVC5 862 aa16■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sema3aO08665 772 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 LdlrP35951 862 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Aldh3a1P47739 453 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cyb5r2Q3KNK3 276 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trappc9Q3U0M1 1148 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 RfflQ6ZQM0 377 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Wdr60Q8C761 999 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 NeproQ8R2U2 564 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Emid1Q91VF5 444 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Lrrc34Q9DAM1 415 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 NfkbizQ9EST8 728 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Zfp651E9PZ11 729 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Vmn2r115E9Q0E7 857 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 H2-Eb1P04230 264 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Alas2P08680 587 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Hoxd13P70217 339 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 G3bp2P97379 482 aaKnown RBP15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 DmwdQ08274 665 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Kctd12Q6WVG3 327 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Plin5Q8BVZ1 463 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fndc3aQ8BX90 1198 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Myoz3Q8R4E4 245 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sh3kbp1Q8R550 709 aaKnown RBP15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 DutQ8VCG1 200 aaKnown RBP15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Mrpl57Q9CQF8 102 aaKnown RBP15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 Prpsap1Q9D0M1 356 aa15.99■□□□□ 0.15
Trim39-203ENSMUST00000113706 6720489N17RikA0A1Y7VJW0 127 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Kdelc2G5E897 503 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pik3r2O08908 722 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gnat1P20612 350 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 H2-Q2Q4KN81 360 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Eif2b4Q61749 524 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Arhgap30Q640N3 1101 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmem151aQ6GQT5 468 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr698Q7TRN4 311 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr667Q7TRP4 326 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slc41a1Q8BJA2 512 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Man2a2Q8BRK9 1152 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Arhgap24Q8C4V1 747 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Arhgap29Q8CGF1 1266 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Vmn1r18Q8R2C8 299 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Dhx36Q8VHK9 1001 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Zfp65Q91W94 390 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Rev1Q920Q2 1249 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Marc1Q9CW42 340 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tspan11Q9D1D1 253 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cldn19Q9ET38 224 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 RalbQ9JIW9 206 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pcm1Q9R0L6 2025 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 CenpcP49452 906 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 NcstnP57716 708 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ythdf1P59326 559 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tial1P70318 392 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Klrb1Q0ZUP1 214 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fam8a1Q3URQ4 399 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 RhocQ62159 193 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Olfr293Q7TS10 336 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trnau1apQ80VC6 287 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 BfarQ8R079 450 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 VitQ8VHI5 650 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 KmoQ91WN4 479 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Dpysl5Q9EQF6 564 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slc13a1Q9JHI4 594 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Plxna4Q80UG2 1893 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Vmn1r76F8VQ63 324 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Il13ra1O09030 424 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fgf18O89101 207 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmem207P86045 143 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 ScinQ60604 715 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Usp1Q8BJQ2 784 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ptk7Q8BKG3 1062 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 LnpepQ8C129 1025 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Aldh4a1Q8CHT0 562 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Glcci1Q8K3I9 537 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cndp2Q9D1A2 475 aaKnown RBP15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Nsmce1Q9D720 266 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmbim4Q9DA39 238 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 HephQ9Z0Z4 1157 aa15.98■□□□□ 0.15
Trim39-203ENSMUST00000113706 B020011L13RikA0A087WQI7 412 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gm12695A2AGB2 545 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 UprtB1AVZ0 310 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fen1P39749 378 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Abce1P61222 599 aaKnown RBP15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Kpnb1P70168 876 aaKnown RBP15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Tmem255bQ5FW56 369 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Casd1Q7TN73 797 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Smad3Q8BUN5 425 aa15.97■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms