RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 4930550L24RikQ99PA7 320 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Decr1Q9CQ62 335 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mdm1Q9D067 708 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Alg14Q9D081 217 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gpr63Q9EQQ3 425 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dnajb9Q9QYI6 222 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ate1Q9Z2A5 516 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adamts9E9PUN6 1931 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Chd7A2AJK6 2986 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adamts6D3Z1A5 1117 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hsd17b7O88736 334 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atf2P16951 487 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gabrb2P63137 512 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pfkfb2P70265 519 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmtc1Q3UV71 942 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Znf148Q61624 794 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dpysl3Q62188 570 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Glra2Q7TNC8 452 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Catsper3Q80W99 395 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zfp418Q8BFS8 652 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 C8bQ8BH35 589 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem72Q8C3K5 275 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem154Q8C4Q9 181 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pde10aQ8CA95 790 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Arhgap29Q8CGF1 1266 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Phc3Q8CHP6 981 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nup85Q8R480 656 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mospd1Q8VEL0 213 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem98Q91X86 226 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ergic2Q9CR89 377 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Efhc2Q9D485 750 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trpc2Q9R244 1172 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gria3Q9Z2W9 888 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ptp4a2O70274 167 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PdgfrbP05622 1098 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Il12bP43432 335 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 IduaP48441 634 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccndbp1Q3TVC7 356 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atxn7l3bQ3UD01 97 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam91a1Q3UVG3 837 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 HrQ61645 1182 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dpy19l3Q71B07 716 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 BfarQ8R079 450 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 MgarpQ8VI64 283 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Clcc1Q99LI2 539 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Grk2Q99MK8 689 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sh2d4aQ9D7V1 421 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 2010109A12RikQ9D875 119 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 IgtpQ9DCE9 423 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ube4bQ9ES00 1173 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Plod1Q9R0E2 728 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dctn3Q9Z0Y1 186 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AspmQ8CJ27 3122 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rp1P56716 2095 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcdh7A0A0A6YY83 1255 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ism2D3Z6A3 493 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm5795E9PZN8 263 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 GzmkO35205 263 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CopeO89079 308 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fcgr1P26151 404 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Micall2Q3TN34 1009 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cdv3Q4VAA2 281 aaKnown RBP6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hsf5Q5ND04 624 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fzd3Q61086 666 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PapolgQ6PCL9 739 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Wfikkn2Q7TQN3 571 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr1128Q7TR47 311 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam53cQ8BXQ8 393 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Dennd1cQ8CFK6 786 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cts3Q91ZD5 332 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ackr4Q924I3 350 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gtf2ird2Q99NI3 936 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Med21Q9CQ39 144 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 MtrexQ9CZU3 1040 aaKnown RBP6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Aff4Q9ESC8 1160 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 D7h11orf16Q9JJR6 402 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm42957D6RFQ2 366 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm20671F6TVX7 576 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 BC024978J3QPC3 361 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 PurbO35295 324 aaKnown RBP6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ring1O35730 406 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccnb1P24860 430 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccna2P51943 422 aaKnown RBP6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lingo4Q149C3 593 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 P2rx5Q3UYI1 455 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vat1Q62465 406 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zfp454Q80Y34 536 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zbtb46Q8BID6 600 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nup93Q8BJ71 819 aaKnown RBP6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pak4Q8BTW9 593 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Q8C1R3 189 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stap2Q8R0L1 411 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lpgat1Q91YX5 370 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cog2Q921L5 731 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tssk3Q9D2E1 268 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ankrd7Q9D504 279 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 1700069L16RikQ9D9H5 109 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Iqcf1Q9D9K8 182 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rgs3Q9DC04 966 aa6.94□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nufip1Q9QXX8 484 aa6.94□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms