RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W PUS1Q12211 544 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W COBP00163 385 aa4.4□□□□□ -1.71
SRL1YOR247W GCR1P07261 785 aa4.4□□□□□ -1.71
SRL1YOR247W PDC5P16467 563 aaKnown RBP4.4□□□□□ -1.71
SRL1YOR247W MSC7P38694 644 aa4.4□□□□□ -1.71
SRL1YOR247W FPR3P38911 411 aaKnown RBP4.4□□□□□ -1.71
SRL1YOR247W PIC2P40035 300 aa4.4□□□□□ -1.71
SRL1YOR247W PPT1P53043 513 aa4.4□□□□□ -1.71
SRL1YOR247W YNR040WP53736 256 aa4.4□□□□□ -1.71
SRL1YOR247W NSG2P53898 299 aa4.4□□□□□ -1.71
SRL1YOR247W NAN1Q02931 896 aaKnown RBP4.4□□□□□ -1.71
SRL1YOR247W OPI10Q08202 246 aa4.4□□□□□ -1.71
SRL1YOR247W THI72Q08579 599 aa4.4□□□□□ -1.71
SRL1YOR247W FAL1Q12099 399 aaKnown RBP4.4□□□□□ -1.71
SRL1YOR247W FUS1P11710 512 aa4.39□□□□□ -1.71
SRL1YOR247W PRI2P20457 528 aa4.39□□□□□ -1.71
SRL1YOR247W NPR1P22211 790 aa4.39□□□□□ -1.71
SRL1YOR247W DUR3P33413 735 aa4.39□□□□□ -1.71
SRL1YOR247W RIM11P38615 370 aa4.39□□□□□ -1.71
SRL1YOR247W PEX28P38848 579 aa4.39□□□□□ -1.71
SRL1YOR247W XKS1P42826 600 aa4.39□□□□□ -1.71
SRL1YOR247W YNR014WP53719 212 aa4.39□□□□□ -1.71
SRL1YOR247W PEX13P80667 386 aa4.39□□□□□ -1.71
SRL1YOR247W NOG1Q02892 647 aaKnown RBP4.39□□□□□ -1.71
SRL1YOR247W CIT2P08679 460 aa4.38□□□□□ -1.71
SRL1YOR247W PRP5P21372 849 aaPredicted RBP4.38□□□□□ -1.71
SRL1YOR247W DUT1P33317 147 aa4.38□□□□□ -1.71
SRL1YOR247W YKL077WP36081 392 aa4.38□□□□□ -1.71
SRL1YOR247W ENT3P47160 408 aa4.38□□□□□ -1.71
SRL1YOR247W IOC4Q04213 475 aa4.38□□□□□ -1.71
SRL1YOR247W BDF2Q07442 638 aa4.38□□□□□ -1.71
SRL1YOR247W SPO75Q07798 868 aa4.38□□□□□ -1.71
SRL1YOR247W CMR1Q12510 522 aaKnown RBP4.38□□□□□ -1.71
SRL1YOR247W RAD4P14736 754 aa4.37□□□□□ -1.71
SRL1YOR247W MSH3P25336 1018 aa4.37□□□□□ -1.71
SRL1YOR247W SPF1P39986 1215 aaKnown RBP4.37□□□□□ -1.71
SRL1YOR247W INP51P40559 946 aaKnown RBP4.37□□□□□ -1.71
SRL1YOR247W TIM54P47045 478 aa4.37□□□□□ -1.71
SRL1YOR247W YGL140CP53120 1219 aa4.37□□□□□ -1.71
SRL1YOR247W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71 RIP-Chip
SRL1YOR247W SPO20Q04359 397 aa4.37□□□□□ -1.71
SRL1YOR247W SEC23P15303 768 aaKnown RBP4.36□□□□□ -1.71
SRL1YOR247W IDI1P15496 288 aa4.36□□□□□ -1.71
SRL1YOR247W BAS1P22035 811 aa4.36□□□□□ -1.71
SRL1YOR247W VMA4P22203 233 aaKnown RBP4.36□□□□□ -1.71
SRL1YOR247W PBP2P38151 413 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SRL1YOR247W SNF7P39929 240 aaKnown RBP4.36□□□□□ -1.71
SRL1YOR247W BOI2P39969 1040 aa4.36□□□□□ -1.71
SRL1YOR247W CHZ1P40019 153 aaPredicted RBP4.36□□□□□ -1.71
SRL1YOR247W PRK1P40494 810 aa4.36□□□□□ -1.71
SRL1YOR247W BUD6P41697 788 aa4.36□□□□□ -1.71
SRL1YOR247W YJL181WP46987 611 aa4.36□□□□□ -1.71
SRL1YOR247W HUL5P53119 910 aa4.36□□□□□ -1.71
SRL1YOR247W TYW3P53177 273 aa4.36□□□□□ -1.71
SRL1YOR247W ALG12P53730 551 aa4.36□□□□□ -1.71
SRL1YOR247W MTC5Q03897 1148 aa4.36□□□□□ -1.71
SRL1YOR247W GLO4Q12320 285 aa4.36□□□□□ -1.71
SRL1YOR247W OSH2Q12451 1283 aa4.36□□□□□ -1.71
SRL1YOR247W SCT1P32784 759 aa4.35□□□□□ -1.71
SRL1YOR247W MDJ1P35191 511 aa4.35□□□□□ -1.71
SRL1YOR247W ATG14P38270 344 aa4.35□□□□□ -1.71
SRL1YOR247W LEM3P42838 414 aa4.35□□□□□ -1.71
SRL1YOR247W YFL066CP43538 392 aa4.35□□□□□ -1.71
SRL1YOR247W BIO5P53744 561 aaKnown RBP4.35□□□□□ -1.71
SRL1YOR247W SIW14P53965 281 aa4.35□□□□□ -1.71
SRL1YOR247W YPR053CQ6Q5F3 151 aa4.35□□□□□ -1.71
SRL1YOR247W NHA1Q99271 985 aa4.35□□□□□ -1.71
SRL1YOR247W MET6P05694 767 aaKnown RBP4.34□□□□□ -1.71
SRL1YOR247W AGP1P25376 633 aa4.34□□□□□ -1.71
SRL1YOR247W MRP8P35719 219 aa4.34□□□□□ -1.71
SRL1YOR247W MCX1P38323 520 aaPredicted RBP4.34□□□□□ -1.71
SRL1YOR247W TAT2P38967 592 aa4.34□□□□□ -1.71
SRL1YOR247W FET4P40988 552 aa4.34□□□□□ -1.71
SRL1YOR247W YJR124CP47159 448 aa4.34□□□□□ -1.71
SRL1YOR247W GUP1P53154 560 aa4.34□□□□□ -1.71
SRL1YOR247W EEB1Q02891 456 aa4.34□□□□□ -1.71
SRL1YOR247W UTP14Q04500 899 aaKnown RBP4.34□□□□□ -1.71
SRL1YOR247W POB3Q04636 552 aaKnown RBP4.34□□□□□ -1.71
SRL1YOR247W TDA6Q06466 467 aa4.34□□□□□ -1.71
SRL1YOR247W HDA2Q06629 674 aa4.34□□□□□ -1.71
SRL1YOR247W SLP1Q12232 587 aa4.34□□□□□ -1.71
SRL1YOR247W SBA1P28707 216 aaKnown RBP4.33□□□□□ -1.72
SRL1YOR247W LYP1P32487 611 aa4.33□□□□□ -1.72
SRL1YOR247W ALG14P38242 237 aa4.33□□□□□ -1.72
SRL1YOR247W GGA2P38817 585 aaKnown RBP4.33□□□□□ -1.72
SRL1YOR247W IRR1P40541 1150 aa4.33□□□□□ -1.72
SRL1YOR247W SBE2P42223 864 aaKnown RBP4.33□□□□□ -1.72
SRL1YOR247W MTR4P47047 1073 aaKnown RBP4.33□□□□□ -1.72
SRL1YOR247W GNP1P48813 663 aa4.33□□□□□ -1.72
SRL1YOR247W FAR11P53917 953 aa4.33□□□□□ -1.72
SRL1YOR247W YMR187CQ03236 431 aa4.33□□□□□ -1.72
SRL1YOR247W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SRL1YOR247W SHE9Q04172 456 aa4.33□□□□□ -1.72
SRL1YOR247W SOG2Q08817 791 aa4.33□□□□□ -1.72
SRL1YOR247W TRP2P00899 507 aaKnown RBP4.32□□□□□ -1.72
SRL1YOR247W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SRL1YOR247W HTS1P07263 546 aaKnown RBP4.32□□□□□ -1.72
SRL1YOR247W HVG1P0CE11 249 aa4.32□□□□□ -1.72
SRL1YOR247W HSP60P19882 572 aaKnown RBP4.32□□□□□ -1.72
SRL1YOR247W RER2P35196 286 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms