RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C DUR3P33413 735 aa3.11□□□□□ -1.91
VPS35YJL154C SAP155P43612 1002 aa3.11□□□□□ -1.91
VPS35YJL154C UTP22P53254 1237 aaPredicted RBP3.11□□□□□ -1.91
VPS35YJL154C TAF13P11747 167 aa3.1□□□□□ -1.91
VPS35YJL154C KNS1P32350 737 aaPredicted RBP3.1□□□□□ -1.91
VPS35YJL154C FAR11P53917 953 aa3.1□□□□□ -1.91
VPS35YJL154C SPO20Q04359 397 aa3.1□□□□□ -1.91
VPS35YJL154C DPH6Q12429 685 aa3.1□□□□□ -1.91
VPS35YJL154C GPM1P00950 247 aaKnown RBP3.1□□□□□ -1.91
VPS35YJL154C CDC34P14682 295 aa3.1□□□□□ -1.91
VPS35YJL154C TFA2P36145 328 aa3.1□□□□□ -1.91
VPS35YJL154C GIP2P40036 548 aa3.1□□□□□ -1.91
VPS35YJL154C YNR065CP53751 1116 aa3.1□□□□□ -1.91
VPS35YJL154C NHA1Q99271 985 aa3.1□□□□□ -1.91
VPS35YJL154C YTA7P40340 1379 aa3.09□□□□□ -1.91
VPS35YJL154C MRP10O75012 95 aa3.09□□□□□ -1.91
VPS35YJL154C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91 RIP-Chip
VPS35YJL154C PRI2P20457 528 aa3.09□□□□□ -1.91
VPS35YJL154C SRP40P32583 406 aaPredicted RBP3.09□□□□□ -1.91
VPS35YJL154C PIC2P40035 300 aa3.09□□□□□ -1.91
VPS35YJL154C TED1P40533 473 aa3.09□□□□□ -1.91
VPS35YJL154C YNR014WP53719 212 aa3.09□□□□□ -1.91
VPS35YJL154C AVO1Q08236 1176 aa3.09□□□□□ -1.91
VPS35YJL154C SLP1Q12232 587 aa3.09□□□□□ -1.91
VPS35YJL154C YOR131CQ12486 218 aa3.09□□□□□ -1.91
VPS35YJL154C GCR1P07261 785 aa3.09□□□□□ -1.92
VPS35YJL154C HTS1P07263 546 aaKnown RBP3.09□□□□□ -1.92
VPS35YJL154C PGM2P37012 569 aaKnown RBP3.09□□□□□ -1.92
VPS35YJL154C YJL049WP47048 450 aa3.09□□□□□ -1.92
VPS35YJL154C FAA4P47912 694 aaKnown RBP3.09□□□□□ -1.92
VPS35YJL154C HAS1Q03532 505 aaKnown RBP3.09□□□□□ -1.92
VPS35YJL154C TDA5Q06417 326 aaKnown RBP3.09□□□□□ -1.92
VPS35YJL154C PRP5P21372 849 aaPredicted RBP3.08□□□□□ -1.92
VPS35YJL154C BAS1P22035 811 aa3.08□□□□□ -1.92
VPS35YJL154C VMA4P22203 233 aaKnown RBP3.08□□□□□ -1.92
VPS35YJL154C HSE1P38753 452 aa3.08□□□□□ -1.92
VPS35YJL154C PAN5P38787 379 aa3.08□□□□□ -1.92
VPS35YJL154C YGL140CP53120 1219 aa3.08□□□□□ -1.92
VPS35YJL154C NOG1Q02892 647 aaKnown RBP3.08□□□□□ -1.92
VPS35YJL154C EST2Q06163 884 aa3.08□□□□□ -1.92
VPS35YJL154C YOL098CQ12496 1037 aa3.08□□□□□ -1.92
VPS35YJL154C SEC23P15303 768 aaKnown RBP3.08□□□□□ -1.92
VPS35YJL154C MAE1P36013 669 aaKnown RBP3.08□□□□□ -1.92
VPS35YJL154C REI1P38344 393 aaPredicted RBP3.08□□□□□ -1.92
VPS35YJL154C SNF7P39929 240 aaKnown RBP3.08□□□□□ -1.92
VPS35YJL154C JJJ3P47138 172 aa3.08□□□□□ -1.92
VPS35YJL154C YNR063WP53749 607 aa3.08□□□□□ -1.92
VPS35YJL154C GIS4Q04233 774 aa3.08□□□□□ -1.92
VPS35YJL154C HPF1Q05164 967 aa3.08□□□□□ -1.92
VPS35YJL154C FPR4Q06205 392 aaPredicted RBP3.08□□□□□ -1.92
VPS35YJL154C LAP2Q10740 671 aa3.08□□□□□ -1.92
VPS35YJL154C NAR1P23503 491 aaKnown RBP3.07□□□□□ -1.92
VPS35YJL154C YKL091CP33324 310 aaKnown RBP3.07□□□□□ -1.92
VPS35YJL154C YIG1Q08956 461 aa3.07□□□□□ -1.92
VPS35YJL154C ELG1Q12050 791 aa3.07□□□□□ -1.92
VPS35YJL154C AMN1P38285 549 aaPredicted RBP3.07□□□□□ -1.92
VPS35YJL154C OSW7P43611 510 aa3.07□□□□□ -1.92
VPS35YJL154C GCV1P48015 400 aa3.07□□□□□ -1.92
VPS35YJL154C NAN1Q02931 896 aaKnown RBP3.07□□□□□ -1.92
VPS35YJL154C HDA2Q06629 674 aa3.07□□□□□ -1.92
VPS35YJL154C CDC53Q12018 815 aaKnown RBP3.07□□□□□ -1.92
VPS35YJL154C SSF2Q12153 453 aaPredicted RBP3.07□□□□□ -1.92
VPS35YJL154C EXO5P38289 585 aa3.06□□□□□ -1.92
VPS35YJL154C OCA5P38738 679 aa3.06□□□□□ -1.92
VPS35YJL154C BOI2P39969 1040 aa3.06□□□□□ -1.92
VPS35YJL154C ENT3P47160 408 aa3.06□□□□□ -1.92
VPS35YJL154C SIW14P53965 281 aa3.06□□□□□ -1.92
VPS35YJL154C MEC3Q02574 474 aa3.06□□□□□ -1.92
VPS35YJL154C AI1P03875 834 aa3.06□□□□□ -1.92
VPS35YJL154C ADD66P36040 267 aa3.06□□□□□ -1.92
VPS35YJL154C ARL1P38116 183 aaKnown RBP3.06□□□□□ -1.92
VPS35YJL154C MCM7P38132 845 aa3.06□□□□□ -1.92
VPS35YJL154C DSE4P53753 1117 aa3.06□□□□□ -1.92
VPS35YJL154C OPI10Q08202 246 aa3.06□□□□□ -1.92
VPS35YJL154C HVG1P0CE11 249 aa3.06□□□□□ -1.92
VPS35YJL154C LYP1P32487 611 aa3.06□□□□□ -1.92
VPS35YJL154C SLS1P42900 643 aa3.06□□□□□ -1.92
VPS35YJL154C TIM54P47045 478 aa3.06□□□□□ -1.92
VPS35YJL154C TYW3P53177 273 aa3.06□□□□□ -1.92
VPS35YJL154C ORC1P54784 914 aaPredicted RBP3.06□□□□□ -1.92
VPS35YJL154C ROD1Q02805 837 aa3.06□□□□□ -1.92
VPS35YJL154C TY1A-LR4P0C2I8 440 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C TY1A-DR6P0CX70 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-ER1P0CX71 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-LR2P0CX72 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-PLP0CX73 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-JR1P0CX74 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-LR3P0CX75 440 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-ML2P0CX76 440 aa3.05□□□□□ -1.92
VPS35YJL154C YAR028WP39548 234 aa3.05□□□□□ -1.92
VPS35YJL154C UTP5Q04177 643 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C ALG6Q12001 544 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C YOR223WQ12015 292 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-GR1Q12085 440 aa3.05□□□□□ -1.92
VPS35YJL154C OSH2Q12451 1283 aa3.05□□□□□ -1.92
VPS35YJL154C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C TY1A-OLQ92392 440 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C TRP2P00899 507 aaKnown RBP3.05□□□□□ -1.92
VPS35YJL154C NEM1P38757 446 aa3.05□□□□□ -1.92
VPS35YJL154C RRM3P38766 723 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms