RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W KSP1P38691 1029 aaKnown RBP2.98□□□□□ -1.93
UBP1YDL122W VAB2P40003 282 aa2.98□□□□□ -1.93
UBP1YDL122W CST6P40535 587 aa2.98□□□□□ -1.93
UBP1YDL122W HUL4P40985 892 aa2.98□□□□□ -1.93
UBP1YDL122W SPT2P06843 333 aaPredicted RBP2.97□□□□□ -1.93
UBP1YDL122W KEX2P13134 814 aa2.97□□□□□ -1.93
UBP1YDL122W PDI1P17967 522 aaKnown RBP2.97□□□□□ -1.93
UBP1YDL122W SPE2P21182 396 aa2.97□□□□□ -1.93
UBP1YDL122W MCD4P36051 919 aa2.97□□□□□ -1.93
UBP1YDL122W LYS14P40971 790 aa2.97□□□□□ -1.93
UBP1YDL122W RRN7P40992 514 aa2.97□□□□□ -1.93
UBP1YDL122W ACK1Q07622 623 aaPredicted RBP2.97□□□□□ -1.93
UBP1YDL122W GRX4P32642 244 aa2.97□□□□□ -1.93
UBP1YDL122W OCT1P35999 772 aa2.97□□□□□ -1.93
UBP1YDL122W GUA1P38625 525 aaKnown RBP2.97□□□□□ -1.93
UBP1YDL122W FOL2P51601 243 aaKnown RBP2.97□□□□□ -1.93
UBP1YDL122W AIM44Q99299 758 aa2.97□□□□□ -1.93
UBP1YDL122W TEL1P38110 2787 aa2.96□□□□□ -1.94
UBP1YDL122W PFK2P16862 959 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
UBP1YDL122W MFB1Q04922 465 aa2.96□□□□□ -1.94
UBP1YDL122W GAS4Q08271 471 aa2.96□□□□□ -1.94
UBP1YDL122W IKI3Q06706 1349 aaKnown RBP2.96□□□□□ -1.94
UBP1YDL122W PRE10P21242 288 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
UBP1YDL122W TRK2P28584 889 aa2.95□□□□□ -1.94
UBP1YDL122W MTC3P53077 123 aa2.95□□□□□ -1.94
UBP1YDL122W YNL115CP53925 644 aa2.95□□□□□ -1.94
UBP1YDL122W ERF2Q06551 359 aa2.95□□□□□ -1.94
UBP1YDL122W FAA3P39002 694 aa2.95□□□□□ -1.94
UBP1YDL122W BDP1P46678 594 aa2.95□□□□□ -1.94
UBP1YDL122W YGL082WP53155 381 aa2.95□□□□□ -1.94
UBP1YDL122W PUS6P53294 404 aa2.95□□□□□ -1.94
UBP1YDL122W YAF9P53930 226 aa2.95□□□□□ -1.94
UBP1YDL122W YML020WQ03722 664 aa2.95□□□□□ -1.94
UBP1YDL122W PRP42Q03776 544 aaKnown RBP2.95□□□□□ -1.94
UBP1YDL122W PSF3Q12146 194 aa2.95□□□□□ -1.94
UBP1YDL122W MOD5P07884 428 aa2.94□□□□□ -1.94
UBP1YDL122W MIP1P15801 1254 aa2.94□□□□□ -1.94
UBP1YDL122W KRE2P27809 442 aa2.94□□□□□ -1.94
UBP1YDL122W YKR018CP36114 725 aa2.94□□□□□ -1.94
UBP1YDL122W AFG3P39925 761 aa2.94□□□□□ -1.94
UBP1YDL122W LSB3P43603 459 aaKnown RBP2.94□□□□□ -1.94
UBP1YDL122W ATF2P53296 535 aa2.94□□□□□ -1.94
UBP1YDL122W HED1Q03937 162 aa2.94□□□□□ -1.94
UBP1YDL122W AGE1Q04412 482 aa2.94□□□□□ -1.94
UBP1YDL122W DNM1P54861 757 aa2.94□□□□□ -1.94
UBP1YDL122W FLO11P08640 1367 aa2.93□□□□□ -1.94
UBP1YDL122W SRS2P12954 1174 aa2.93□□□□□ -1.94
UBP1YDL122W RGT1P32862 1170 aa2.93□□□□□ -1.94
UBP1YDL122W STM1P39015 273 aaKnown RBP2.93□□□□□ -1.94
UBP1YDL122W PAC1P39946 494 aaKnown RBP2.93□□□□□ -1.94
UBP1YDL122W TUB4P53378 473 aa2.93□□□□□ -1.94
UBP1YDL122W IRC10Q08118 586 aa2.93□□□□□ -1.94
UBP1YDL122W TPD3P31383 635 aa2.93□□□□□ -1.94
UBP1YDL122W RTR1P40084 226 aaPredicted RBP2.93□□□□□ -1.94
UBP1YDL122W BRE5P53741 515 aaKnown RBP2.93□□□□□ -1.94
UBP1YDL122W NIS1P53939 407 aa2.93□□□□□ -1.94
UBP1YDL122W DPH6Q12429 685 aa2.93□□□□□ -1.94
UBP1YDL122W RPS9AO13516 197 aaKnown RBP2.92□□□□□ -1.94
UBP1YDL122W MCM3P24279 971 aaKnown RBP2.92□□□□□ -1.94
UBP1YDL122W PKC1P24583 1151 aa2.92□□□□□ -1.94
UBP1YDL122W POA1P38218 177 aa2.92□□□□□ -1.94
UBP1YDL122W SLX8P40072 274 aa2.92□□□□□ -1.94
UBP1YDL122W EAF1Q06337 982 aa2.92□□□□□ -1.94
UBP1YDL122W KCC4P25389 1037 aa2.92□□□□□ -1.94
UBP1YDL122W PER1P25625 357 aa2.92□□□□□ -1.94
UBP1YDL122W GEF1P37020 779 aa2.92□□□□□ -1.94
UBP1YDL122W SFB3P38810 929 aa2.92□□□□□ -1.94
UBP1YDL122W TFB3Q03290 321 aa2.92□□□□□ -1.94
UBP1YDL122W TAP42Q04372 366 aa2.92□□□□□ -1.94
UBP1YDL122W NOP8Q08287 484 aaPredicted RBP2.92□□□□□ -1.94
UBP1YDL122W YDR524C-BQ3E6R4 66 aa2.92□□□□□ -1.94
UBP1YDL122W ARG82P07250 355 aa2.91□□□□□ -1.94
UBP1YDL122W BCS1P32839 456 aa2.91□□□□□ -1.94
UBP1YDL122W BRL1P38770 471 aa2.91□□□□□ -1.94
UBP1YDL122W KXD1P53158 218 aa2.91□□□□□ -1.94
UBP1YDL122W HEH2Q03281 663 aa2.91□□□□□ -1.94
UBP1YDL122W IMG2P25642 146 aaPredicted RBP2.9□□□□□ -1.94
UBP1YDL122W AOS1Q06624 347 aa2.9□□□□□ -1.94
UBP1YDL122W SUB2Q07478 446 aaKnown RBP2.9□□□□□ -1.94
UBP1YDL122W TRP2P00899 507 aaKnown RBP2.9□□□□□ -1.95
UBP1YDL122W PHR1P05066 565 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
UBP1YDL122W RAD53P22216 821 aa2.9□□□□□ -1.95
UBP1YDL122W HCM1P25364 564 aa2.9□□□□□ -1.95
UBP1YDL122W EUG1P32474 517 aa2.9□□□□□ -1.95
UBP1YDL122W HST2P53686 357 aa2.9□□□□□ -1.95
UBP1YDL122W YNL034WP53963 612 aa2.9□□□□□ -1.95
UBP1YDL122W YNL018CP53976 612 aa2.9□□□□□ -1.95
UBP1YDL122W SKY1Q03656 742 aa2.9□□□□□ -1.95
UBP1YDL122W TIM23P32897 222 aa2.89□□□□□ -1.95
UBP1YDL122W ICP55P40051 511 aa2.89□□□□□ -1.95
UBP1YDL122W HXT10P43581 546 aa2.89□□□□□ -1.95
UBP1YDL122W DSD1P53095 428 aa2.89□□□□□ -1.95
UBP1YDL122W BIO5P53744 561 aaKnown RBP2.89□□□□□ -1.95
UBP1YDL122W AFT1P22149 690 aa2.89□□□□□ -1.95
UBP1YDL122W SLY41P22215 453 aa2.89□□□□□ -1.95
UBP1YDL122W YDJ1P25491 409 aaKnown RBP2.89□□□□□ -1.95
UBP1YDL122W KEL1P38853 1164 aaKnown RBP2.89□□□□□ -1.95
UBP1YDL122W ACA1P39970 489 aa2.89□□□□□ -1.95
UBP1YDL122W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
UBP1YDL122W GSM1P42950 618 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 1020.2 ms