RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
TRIO-225ENST00000639876 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
TRIO-225ENST00000639876 NLRP6P59044 892 aa13.33□□□□□ -0.28
TRIO-225ENST00000639876 CABP1Q9NZU7 370 aa13.33□□□□□ -0.28
TRIO-225ENST00000639876 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
TRIO-225ENST00000639876 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
TRIO-225ENST00000639876 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
TRIO-225ENST00000639876 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
TRIO-225ENST00000639876 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
TRIO-225ENST00000639876 LRP5O75197 1615 aa13.31□□□□□ -0.28
TRIO-225ENST00000639876 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
TRIO-225ENST00000639876 CAMTA1Q9Y6Y1 1673 aa13.31□□□□□ -0.28
TRIO-225ENST00000639876 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
TRIO-225ENST00000639876 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
TRIO-225ENST00000639876 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
TRIO-225ENST00000639876 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
TRIO-225ENST00000639876 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
TRIO-225ENST00000639876 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
TRIO-225ENST00000639876 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 MON2Q7Z3U7 1717 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 TNS1Q9HBL0 1735 aaKnown RBP13.29□□□□□ -0.28
TRIO-225ENST00000639876 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
TRIO-225ENST00000639876 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
TRIO-225ENST00000639876 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
TRIO-225ENST00000639876 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.28
TRIO-225ENST00000639876 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.28
TRIO-225ENST00000639876 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.29
TRIO-225ENST00000639876 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.29
TRIO-225ENST00000639876 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
TRIO-225ENST00000639876 EDC4Q6P2E9 1401 aaKnown RBP13.27□□□□□ -0.29
TRIO-225ENST00000639876 BCL9O00512 1426 aa13.26□□□□□ -0.29
TRIO-225ENST00000639876 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
TRIO-225ENST00000639876 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
TRIO-225ENST00000639876 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
TRIO-225ENST00000639876 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
TRIO-225ENST00000639876 EP400Q96L91 3159 aa13.25□□□□□ -0.29
TRIO-225ENST00000639876 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
TRIO-225ENST00000639876 TOM1L2Q6ZVM7 507 aa13.25□□□□□ -0.29
TRIO-225ENST00000639876 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 DDB1Q16531 1140 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
TRIO-225ENST00000639876 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
TRIO-225ENST00000639876 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
TRIO-225ENST00000639876 NFAT5O94916 1531 aa13.23□□□□□ -0.29
TRIO-225ENST00000639876 COL18A1P39060 1754 aa13.22□□□□□ -0.29
TRIO-225ENST00000639876 RREB1Q92766 1687 aa13.22□□□□□ -0.29
TRIO-225ENST00000639876 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
TRIO-225ENST00000639876 TRIM37O94972 964 aa13.22□□□□□ -0.29
TRIO-225ENST00000639876 APBA3O96018 575 aa13.22□□□□□ -0.29
TRIO-225ENST00000639876 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
TRIO-225ENST00000639876 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
TRIO-225ENST00000639876 ZBTB7CA1YPR0 619 aa13.21□□□□□ -0.29
TRIO-225ENST00000639876 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
TRIO-225ENST00000639876 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
TRIO-225ENST00000639876 PLSCR1O15162 318 aa13.19□□□□□ -0.3
TRIO-225ENST00000639876 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
TRIO-225ENST00000639876 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
TRIO-225ENST00000639876 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
TRIO-225ENST00000639876 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
TRIO-225ENST00000639876 TMF1P82094 1093 aa13.18□□□□□ -0.3
TRIO-225ENST00000639876 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
TRIO-225ENST00000639876 ERBB3P21860 1342 aa13.17□□□□□ -0.3
TRIO-225ENST00000639876 EXOC5O00471 708 aa13.17□□□□□ -0.3
TRIO-225ENST00000639876 EZH2Q15910 746 aaKnown RBP13.17□□□□□ -0.3
TRIO-225ENST00000639876 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
TRIO-225ENST00000639876 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
TRIO-225ENST00000639876 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
TRIO-225ENST00000639876 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
TRIO-225ENST00000639876 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
TRIO-225ENST00000639876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIO-225ENST00000639876 LTN1O94822 1766 aa13.16□□□□□ -0.3
TRIO-225ENST00000639876 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
TRIO-225ENST00000639876 COG3Q96JB2 828 aa13.15□□□□□ -0.3
TRIO-225ENST00000639876 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
TRIO-225ENST00000639876 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
TRIO-225ENST00000639876 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
TRIO-225ENST00000639876 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
TRIO-225ENST00000639876 USP47Q96K76 1375 aa13.13□□□□□ -0.31
TRIO-225ENST00000639876 IL2RBP14784 551 aa13.13□□□□□ -0.31
TRIO-225ENST00000639876 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
TRIO-225ENST00000639876 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
TRIO-225ENST00000639876 SOX12O15370 315 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 TESK2Q96S53 571 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 SLC12A5Q9H2X9 1139 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
TRIO-225ENST00000639876 NME9Q86XW9 330 aa13.11□□□□□ -0.31
TRIO-225ENST00000639876 IP6K1Q92551 441 aa13.11□□□□□ -0.31
TRIO-225ENST00000639876 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
TRIO-225ENST00000639876 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms