RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 ZBTB33Q86T24 672 aa9.65□□□□□ -0.86
CCDC7-214ENST00000639453 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
CCDC7-214ENST00000639453 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
CCDC7-214ENST00000639453 PNMA1Q8ND90 353 aa9.64□□□□□ -0.87
CCDC7-214ENST00000639453 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
CCDC7-214ENST00000639453 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
CCDC7-214ENST00000639453 PPP1R26Q5T8A7 1209 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-214ENST00000639453 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
CCDC7-214ENST00000639453 PTSQ03393 145 aa9.62□□□□□ -0.87
CCDC7-214ENST00000639453 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
CCDC7-214ENST00000639453 KCNMA1Q12791 1236 aa9.61□□□□□ -0.87
CCDC7-214ENST00000639453 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
CCDC7-214ENST00000639453 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
CCDC7-214ENST00000639453 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
CCDC7-214ENST00000639453 PTK2Q05397 1052 aa9.6□□□□□ -0.87
CCDC7-214ENST00000639453 Q6ZVU0 165 aa9.6□□□□□ -0.87
CCDC7-214ENST00000639453 CNTNAP3BQ96NU0 1288 aa9.6□□□□□ -0.87
CCDC7-214ENST00000639453 CNTNAP3Q9BZ76 1288 aa9.6□□□□□ -0.87
CCDC7-214ENST00000639453 SPINT1O43278 529 aa9.59□□□□□ -0.87
CCDC7-214ENST00000639453 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
CCDC7-214ENST00000639453 TMEM151AQ8N4L1 468 aa9.59□□□□□ -0.87
CCDC7-214ENST00000639453 CCDC155Q8N6L0 562 aa9.59□□□□□ -0.87
CCDC7-214ENST00000639453 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
CCDC7-214ENST00000639453 CBLBQ13191 982 aa9.57□□□□□ -0.88
CCDC7-214ENST00000639453 NBPF20Q3BBV1 942 aa9.57□□□□□ -0.88
CCDC7-214ENST00000639453 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
CCDC7-214ENST00000639453 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
CCDC7-214ENST00000639453 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-214ENST00000639453 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
CCDC7-214ENST00000639453 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
CCDC7-214ENST00000639453 SVOPQ8N4V2 548 aa9.55□□□□□ -0.88
CCDC7-214ENST00000639453 CDC14CA4D256 554 aa9.54□□□□□ -0.88
CCDC7-214ENST00000639453 GDF11O95390 407 aa9.54□□□□□ -0.88
CCDC7-214ENST00000639453 RELBQ01201 579 aa9.54□□□□□ -0.88
CCDC7-214ENST00000639453 SKIV2LQ15477 1246 aaKnown RBP9.54□□□□□ -0.88
CCDC7-214ENST00000639453 ITGA6P23229 1130 aa9.53□□□□□ -0.88
CCDC7-214ENST00000639453 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
CCDC7-214ENST00000639453 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
CCDC7-214ENST00000639453 NR6A1Q15406 480 aa9.52□□□□□ -0.89
CCDC7-214ENST00000639453 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
CCDC7-214ENST00000639453 LRRN4Q8WUT4 740 aa9.52□□□□□ -0.89
CCDC7-214ENST00000639453 SLC35F4A4IF30 521 aa9.51□□□□□ -0.89
CCDC7-214ENST00000639453 RASSF7Q02833 373 aa9.51□□□□□ -0.89
CCDC7-214ENST00000639453 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
CCDC7-214ENST00000639453 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
CCDC7-214ENST00000639453 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
CCDC7-214ENST00000639453 DDRGK1Q96HY6 314 aa9.51□□□□□ -0.89
CCDC7-214ENST00000639453 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
CCDC7-214ENST00000639453 AP1G2O75843 785 aa9.5□□□□□ -0.89
CCDC7-214ENST00000639453 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
CCDC7-214ENST00000639453 KRT76Q01546 638 aa9.5□□□□□ -0.89
CCDC7-214ENST00000639453 ADAM32Q8TC27 787 aa9.5□□□□□ -0.89
CCDC7-214ENST00000639453 AGBL1Q96MI9 1066 aa9.5□□□□□ -0.89
CCDC7-214ENST00000639453 CTSOP43234 321 aaPredicted RBP9.49□□□□□ -0.89
CCDC7-214ENST00000639453 RAB15P59190 212 aa9.49□□□□□ -0.89
CCDC7-214ENST00000639453 ZNF395Q9H8N7 513 aaPredicted RBP9.49□□□□□ -0.89
CCDC7-214ENST00000639453 MAP3K10Q02779 954 aa9.48□□□□□ -0.89
CCDC7-214ENST00000639453 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
CCDC7-214ENST00000639453 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
CCDC7-214ENST00000639453 SUZ12Q15022 739 aaKnown RBP9.46□□□□□ -0.9
CCDC7-214ENST00000639453 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CCDC7-214ENST00000639453 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
CCDC7-214ENST00000639453 FOXR1Q6PIV2 292 aa9.46□□□□□ -0.9
CCDC7-214ENST00000639453 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
CCDC7-214ENST00000639453 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.9
CCDC7-214ENST00000639453 ENAMQ9NRM1 1142 aa9.46□□□□□ -0.9
CCDC7-214ENST00000639453 ADH1AP07327 375 aa9.45□□□□□ -0.9
CCDC7-214ENST00000639453 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
CCDC7-214ENST00000639453 LYSMD3Q7Z3D4 306 aa9.45□□□□□ -0.9
CCDC7-214ENST00000639453 ZNF784Q8NCA9 323 aaPredicted RBP9.45□□□□□ -0.9
CCDC7-214ENST00000639453 RNFT1Q5M7Z0 435 aa9.44□□□□□ -0.9
CCDC7-214ENST00000639453 IGHA1P01876 353 aa9.43□□□□□ -0.9
CCDC7-214ENST00000639453 PTGIRP43119 386 aa9.43□□□□□ -0.9
CCDC7-214ENST00000639453 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
CCDC7-214ENST00000639453 TMPRSS4Q9NRS4 437 aa9.43□□□□□ -0.9
CCDC7-214ENST00000639453 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
CCDC7-214ENST00000639453 IRS1P35568 1242 aa9.42□□□□□ -0.9
CCDC7-214ENST00000639453 FOXK2Q01167 660 aa9.42□□□□□ -0.9
CCDC7-214ENST00000639453 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
CCDC7-214ENST00000639453 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
CCDC7-214ENST00000639453 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
CCDC7-214ENST00000639453 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCDC7-214ENST00000639453 GSK3AP49840 483 aa9.41□□□□□ -0.9
CCDC7-214ENST00000639453 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
CCDC7-214ENST00000639453 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
CCDC7-214ENST00000639453 DNMT3AQ9Y6K1 912 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-214ENST00000639453 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
CCDC7-214ENST00000639453 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
CCDC7-214ENST00000639453 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
CCDC7-214ENST00000639453 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
CCDC7-214ENST00000639453 OCSTAMPQ9BR26 566 aa9.39□□□□□ -0.91
CCDC7-214ENST00000639453 KRTAP4-6Q9BYQ5 205 aa9.39□□□□□ -0.91
CCDC7-214ENST00000639453 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
CCDC7-214ENST00000639453 PRICKLE2Q7Z3G6 844 aa9.38□□□□□ -0.91
CCDC7-214ENST00000639453 ZNF592Q92610 1267 aa9.38□□□□□ -0.91
CCDC7-214ENST00000639453 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
CCDC7-214ENST00000639453 ATP5J2-PTCD1G3V325 749 aa9.37□□□□□ -0.91
CCDC7-214ENST00000639453 H7C1W4 665 aa9.37□□□□□ -0.91
CCDC7-214ENST00000639453 LILRA1O75019 489 aa9.37□□□□□ -0.91
CCDC7-214ENST00000639453 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms