RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
SCARB2-217ENST00000639324 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
SCARB2-217ENST00000639324 NR6A1Q15406 480 aa11.18□□□□□ -0.62
SCARB2-217ENST00000639324 FKBPLQ9UIM3 349 aa11.18□□□□□ -0.62
SCARB2-217ENST00000639324 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
SCARB2-217ENST00000639324 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
SCARB2-217ENST00000639324 SOS2Q07890 1332 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-217ENST00000639324 EPS8L1Q8TE68 723 aa11.15□□□□□ -0.62
SCARB2-217ENST00000639324 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
SCARB2-217ENST00000639324 VSIG8P0DPA2 414 aa11.14□□□□□ -0.63
SCARB2-217ENST00000639324 BMP2P12643 396 aa11.14□□□□□ -0.63
SCARB2-217ENST00000639324 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
SCARB2-217ENST00000639324 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
SCARB2-217ENST00000639324 MAN1A2O60476 641 aa11.13□□□□□ -0.63
SCARB2-217ENST00000639324 PPP1R26Q5T8A7 1209 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-217ENST00000639324 ARHGAP9Q9BRR9 750 aa11.13□□□□□ -0.63
SCARB2-217ENST00000639324 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-217ENST00000639324 CBLBQ13191 982 aa11.12□□□□□ -0.63
SCARB2-217ENST00000639324 AP1G2O75843 785 aa11.11□□□□□ -0.63
SCARB2-217ENST00000639324 Q6ZVU0 165 aa11.1□□□□□ -0.63
SCARB2-217ENST00000639324 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
SCARB2-217ENST00000639324 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-217ENST00000639324 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
SCARB2-217ENST00000639324 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
SCARB2-217ENST00000639324 UPP2O95045 317 aa11.09□□□□□ -0.63
SCARB2-217ENST00000639324 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
SCARB2-217ENST00000639324 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
SCARB2-217ENST00000639324 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
SCARB2-217ENST00000639324 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
SCARB2-217ENST00000639324 ADAM32Q8TC27 787 aa11.07□□□□□ -0.64
SCARB2-217ENST00000639324 ZBTB33Q86T24 672 aa11.06□□□□□ -0.64
SCARB2-217ENST00000639324 RFC5P40937 340 aa11.05□□□□□ -0.64
SCARB2-217ENST00000639324 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
SCARB2-217ENST00000639324 GPSM3Q9Y4H4 160 aa11.05□□□□□ -0.64
SCARB2-217ENST00000639324 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
SCARB2-217ENST00000639324 SPINT1O43278 529 aa11.04□□□□□ -0.64
SCARB2-217ENST00000639324 PTK2Q05397 1052 aa11.04□□□□□ -0.64
SCARB2-217ENST00000639324 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
SCARB2-217ENST00000639324 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-217ENST00000639324 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
SCARB2-217ENST00000639324 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
SCARB2-217ENST00000639324 FIGNL2A6NMB9 653 aa11.01□□□□□ -0.65
SCARB2-217ENST00000639324 PTSQ03393 145 aa11.01□□□□□ -0.65
SCARB2-217ENST00000639324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.65
SCARB2-217ENST00000639324 TMPRSS4Q9NRS4 437 aa11.01□□□□□ -0.65
SCARB2-217ENST00000639324 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
SCARB2-217ENST00000639324 DHX9Q08211 1270 aaKnown RBP11□□□□□ -0.65
SCARB2-217ENST00000639324 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
SCARB2-217ENST00000639324 CTSOP43234 321 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-217ENST00000639324 KRT76Q01546 638 aa10.99□□□□□ -0.65
SCARB2-217ENST00000639324 KDF1Q8NAX2 398 aaPredicted RBP10.98□□□□□ -0.65
SCARB2-217ENST00000639324 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
SCARB2-217ENST00000639324 FAM181BA6NEQ2 426 aa10.97□□□□□ -0.65
SCARB2-217ENST00000639324 ESPNB1AK53 854 aa10.97□□□□□ -0.65
SCARB2-217ENST00000639324 LILRA1O75019 489 aa10.97□□□□□ -0.65
SCARB2-217ENST00000639324 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-217ENST00000639324 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
SCARB2-217ENST00000639324 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
SCARB2-217ENST00000639324 RELBQ01201 579 aa10.96□□□□□ -0.65
SCARB2-217ENST00000639324 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
SCARB2-217ENST00000639324 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-217ENST00000639324 RAB15P59190 212 aa10.95□□□□□ -0.66
SCARB2-217ENST00000639324 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
SCARB2-217ENST00000639324 GJD4Q96KN9 370 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-217ENST00000639324 SLC35F4A4IF30 521 aa10.94□□□□□ -0.66
SCARB2-217ENST00000639324 ZNF395Q9H8N7 513 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-217ENST00000639324 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
SCARB2-217ENST00000639324 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
SCARB2-217ENST00000639324 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
SCARB2-217ENST00000639324 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
SCARB2-217ENST00000639324 PCMTD1Q96MG8 357 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-217ENST00000639324 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
SCARB2-217ENST00000639324 ADH1AP07327 375 aa10.91□□□□□ -0.66
SCARB2-217ENST00000639324 TMEM259Q4ZIN3 620 aa10.91□□□□□ -0.66
SCARB2-217ENST00000639324 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
SCARB2-217ENST00000639324 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
SCARB2-217ENST00000639324 POLMQ9NP87 494 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-217ENST00000639324 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
SCARB2-217ENST00000639324 RNFT1Q5M7Z0 435 aa10.89□□□□□ -0.67
SCARB2-217ENST00000639324 GPR37L1O60883 481 aa10.88□□□□□ -0.67
SCARB2-217ENST00000639324 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
SCARB2-217ENST00000639324 CNTNAP3BQ96NU0 1288 aa10.88□□□□□ -0.67
SCARB2-217ENST00000639324 COL25A1Q9BXS0 654 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-217ENST00000639324 CNTNAP3Q9BZ76 1288 aa10.88□□□□□ -0.67
SCARB2-217ENST00000639324 ITGA6P23229 1130 aa10.87□□□□□ -0.67
SCARB2-217ENST00000639324 PTGIRP43119 386 aa10.87□□□□□ -0.67
SCARB2-217ENST00000639324 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-217ENST00000639324 CYLDQ9NQC7 956 aa10.87□□□□□ -0.67
SCARB2-217ENST00000639324 ZBBXA8MT70 800 aa10.86□□□□□ -0.67
SCARB2-217ENST00000639324 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-217ENST00000639324 SEPT12Q8IYM1 358 aa10.86□□□□□ -0.67
SCARB2-217ENST00000639324 GSK3AP49840 483 aa10.85□□□□□ -0.67
SCARB2-217ENST00000639324 VWA5B2Q8N398 1253 aa10.84□□□□□ -0.67
SCARB2-217ENST00000639324 PCDHB9Q9Y5E1 797 aa10.83□□□□□ -0.68
SCARB2-217ENST00000639324 CUEDC1Q9NWM3 386 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-217ENST00000639324 NACADO15069 1562 aa10.81□□□□□ -0.68
SCARB2-217ENST00000639324 CDC14CA4D256 554 aa10.8□□□□□ -0.68
SCARB2-217ENST00000639324 ZNF385CQ66K41 422 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-217ENST00000639324 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
SCARB2-217ENST00000639324 WHAMMQ8TF30 809 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms