RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TSEN34Q9BSV6 310 aaKnown RBP9□□□□□ -0.97
CCDC7-211ENST00000638889 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
CCDC7-211ENST00000638889 MAN1A2O60476 641 aa8.99□□□□□ -0.97
CCDC7-211ENST00000638889 VEGFBP49765 207 aa8.99□□□□□ -0.97
CCDC7-211ENST00000638889 FBXO31Q5XUX0 539 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-211ENST00000638889 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-211ENST00000638889 PTK2Q05397 1052 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 NR6A1Q15406 480 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 ZBTB33Q86T24 672 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
CCDC7-211ENST00000638889 FAM181BA6NEQ2 426 aa8.97□□□□□ -0.97
CCDC7-211ENST00000638889 SOBPA7XYQ1 873 aa8.97□□□□□ -0.97
CCDC7-211ENST00000638889 VSIG8P0DPA2 414 aa8.97□□□□□ -0.97
CCDC7-211ENST00000638889 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
CCDC7-211ENST00000638889 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
CCDC7-211ENST00000638889 ERBB4Q15303 1308 aa8.97□□□□□ -0.97
CCDC7-211ENST00000638889 AP1G2O75843 785 aa8.96□□□□□ -0.98
CCDC7-211ENST00000638889 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.98
CCDC7-211ENST00000638889 KCTD15Q96SI1 283 aaPredicted RBP8.96□□□□□ -0.98
CCDC7-211ENST00000638889 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
CCDC7-211ENST00000638889 Q6ZVU0 165 aa8.95□□□□□ -0.98
CCDC7-211ENST00000638889 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
CCDC7-211ENST00000638889 USP17L8P0C7I0 530 aa8.93□□□□□ -0.98
CCDC7-211ENST00000638889 OCSTAMPQ9BR26 566 aa8.93□□□□□ -0.98
CCDC7-211ENST00000638889 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
CCDC7-211ENST00000638889 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.92□□□□□ -0.98
CCDC7-211ENST00000638889 ADAM32Q8TC27 787 aa8.92□□□□□ -0.98
CCDC7-211ENST00000638889 DNMT3LQ9UJW3 386 aa8.92□□□□□ -0.98
CCDC7-211ENST00000638889 TTLL8A6PVC2 850 aa8.91□□□□□ -0.98
CCDC7-211ENST00000638889 SPINT1O43278 529 aa8.91□□□□□ -0.98
CCDC7-211ENST00000638889 PPFIA3O75145 1194 aa8.91□□□□□ -0.98
CCDC7-211ENST00000638889 RFC5P40937 340 aa8.91□□□□□ -0.98
CCDC7-211ENST00000638889 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
CCDC7-211ENST00000638889 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
CCDC7-211ENST00000638889 SLC24A1O60721 1099 aa8.9□□□□□ -0.98
CCDC7-211ENST00000638889 CBLBQ13191 982 aa8.9□□□□□ -0.98
CCDC7-211ENST00000638889 EPS8L1Q8TE68 723 aa8.9□□□□□ -0.98
CCDC7-211ENST00000638889 PCMTD1Q96MG8 357 aaPredicted RBP8.9□□□□□ -0.98
CCDC7-211ENST00000638889 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
CCDC7-211ENST00000638889 HMX1Q9NP08 348 aaPredicted RBP8.89□□□□□ -0.99
CCDC7-211ENST00000638889 DZIP3Q86Y13 1208 aaKnown RBP8.87□□□□□ -0.99
CCDC7-211ENST00000638889 TRIM52Q96A61 297 aa8.87□□□□□ -0.99
CCDC7-211ENST00000638889 ESPNB1AK53 854 aa8.85□□□□□ -0.99
CCDC7-211ENST00000638889 PTSQ03393 145 aa8.85□□□□□ -0.99
CCDC7-211ENST00000638889 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
CCDC7-211ENST00000638889 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
CCDC7-211ENST00000638889 FIGNL2A6NMB9 653 aa8.83□□□□□ -1
CCDC7-211ENST00000638889 NEUROD2Q15784 382 aa8.83□□□□□ -1
CCDC7-211ENST00000638889 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
CCDC7-211ENST00000638889 ADH1AP07327 375 aa8.82□□□□□ -1
CCDC7-211ENST00000638889 RELBQ01201 579 aa8.82□□□□□ -1
CCDC7-211ENST00000638889 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
CCDC7-211ENST00000638889 NANOS1Q8WY41 292 aaKnown RBP8.82□□□□□ -1
CCDC7-211ENST00000638889 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
CCDC7-211ENST00000638889 SLC35F4A4IF30 521 aa8.81□□□□□ -1
CCDC7-211ENST00000638889 CTSOP43234 321 aaPredicted RBP8.81□□□□□ -1
CCDC7-211ENST00000638889 CCDC125Q86Z20 511 aa8.81□□□□□ -1
CCDC7-211ENST00000638889 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
CCDC7-211ENST00000638889 TMPRSS4Q9NRS4 437 aa8.81□□□□□ -1
CCDC7-211ENST00000638889 LILRA1O75019 489 aa8.8□□□□□ -1
CCDC7-211ENST00000638889 IL27Q8NEV9 243 aa8.8□□□□□ -1
CCDC7-211ENST00000638889 INSM2Q96T92 566 aaPredicted RBP8.8□□□□□ -1
CCDC7-211ENST00000638889 ZBBXA8MT70 800 aa8.79□□□□□ -1
CCDC7-211ENST00000638889 PTGIRP43119 386 aa8.79□□□□□ -1
CCDC7-211ENST00000638889 RAB15P59190 212 aa8.79□□□□□ -1
CCDC7-211ENST00000638889 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
CCDC7-211ENST00000638889 POLMQ9NP87 494 aaPredicted RBP8.79□□□□□ -1
CCDC7-211ENST00000638889 SOCS7O14512 581 aa8.78□□□□□ -1
CCDC7-211ENST00000638889 ADD1P35611 737 aaKnown RBP8.78□□□□□ -1
CCDC7-211ENST00000638889 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
CCDC7-211ENST00000638889 RNF217Q8TC41 542 aa8.78□□□□□ -1
CCDC7-211ENST00000638889 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-211ENST00000638889 ZNF592Q92610 1267 aa8.77□□□□□ -1.01
CCDC7-211ENST00000638889 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
CCDC7-211ENST00000638889 ITGA6P23229 1130 aa8.76□□□□□ -1.01
CCDC7-211ENST00000638889 KDF1Q8NAX2 398 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-211ENST00000638889 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
CCDC7-211ENST00000638889 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
CCDC7-211ENST00000638889 KRT76Q01546 638 aa8.75□□□□□ -1.01
CCDC7-211ENST00000638889 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
CCDC7-211ENST00000638889 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CCDC7-211ENST00000638889 BRPF1P55201 1214 aaPredicted RBP8.74□□□□□ -1.01
CCDC7-211ENST00000638889 RNF20Q5VTR2 975 aa8.74□□□□□ -1.01
CCDC7-211ENST00000638889 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
CCDC7-211ENST00000638889 SV2AQ7L0J3 742 aa8.74□□□□□ -1.01
CCDC7-211ENST00000638889 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
CCDC7-211ENST00000638889 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
CCDC7-211ENST00000638889 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
CCDC7-211ENST00000638889 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
CCDC7-211ENST00000638889 LYSMD3Q7Z3D4 306 aa8.73□□□□□ -1.01
CCDC7-211ENST00000638889 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
CCDC7-211ENST00000638889 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
CCDC7-211ENST00000638889 SENP3-EIF4A1A0A087X0R7 540 aa8.72□□□□□ -1.01
CCDC7-211ENST00000638889 GPC1P35052 558 aa8.72□□□□□ -1.01
CCDC7-211ENST00000638889 NR1H3Q13133 447 aa8.72□□□□□ -1.01
CCDC7-211ENST00000638889 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
CCDC7-211ENST00000638889 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
CCDC7-211ENST00000638889 APBB1O00213 710 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms