RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 STRN4Q9NRL3 753 aa20.24■□□□□ 0.83
KCNMA1-239ENST00000638531 CRB1P82279 1406 aa20.24■□□□□ 0.83
KCNMA1-239ENST00000638531 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
KCNMA1-239ENST00000638531 RGPD1P0DJD0 1748 aa20.23■□□□□ 0.83
KCNMA1-239ENST00000638531 SEPT12Q8IYM1 358 aa20.23■□□□□ 0.83
KCNMA1-239ENST00000638531 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
KCNMA1-239ENST00000638531 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
KCNMA1-239ENST00000638531 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
KCNMA1-239ENST00000638531 SOX12O15370 315 aa20.2■□□□□ 0.82
KCNMA1-239ENST00000638531 EVA1CP58658 441 aa20.2■□□□□ 0.82
KCNMA1-239ENST00000638531 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
KCNMA1-239ENST00000638531 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
KCNMA1-239ENST00000638531 MAP2P11137 1827 aaKnown RBP20.19■□□□□ 0.82
KCNMA1-239ENST00000638531 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
KCNMA1-239ENST00000638531 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
KCNMA1-239ENST00000638531 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
KCNMA1-239ENST00000638531 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
KCNMA1-239ENST00000638531 BARGINQ6ZT62 677 aa20.17■□□□□ 0.82
KCNMA1-239ENST00000638531 COG3Q96JB2 828 aa20.17■□□□□ 0.82
KCNMA1-239ENST00000638531 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 SBF2Q86WG5 1849 aa20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 A0A0G2JS52 829 aa20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 MYT1Q01538 1121 aa20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 THRAP3Q9Y2W1 955 aaKnown RBP20.16■□□□□ 0.82
KCNMA1-239ENST00000638531 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
KCNMA1-239ENST00000638531 TCP11L2Q8N4U5 519 aa20.15■□□□□ 0.82
KCNMA1-239ENST00000638531 FYB1O15117 783 aa20.14■□□□□ 0.81
KCNMA1-239ENST00000638531 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
KCNMA1-239ENST00000638531 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
KCNMA1-239ENST00000638531 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
KCNMA1-239ENST00000638531 ERBB3P21860 1342 aa20.12■□□□□ 0.81
KCNMA1-239ENST00000638531 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
KCNMA1-239ENST00000638531 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
KCNMA1-239ENST00000638531 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
KCNMA1-239ENST00000638531 TOM1L2Q6ZVM7 507 aa20.11■□□□□ 0.81
KCNMA1-239ENST00000638531 CCDC7Q96M83 1385 aa20.1■□□□□ 0.81
KCNMA1-239ENST00000638531 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
KCNMA1-239ENST00000638531 MAP3K19Q56UN5 1328 aa20.09■□□□□ 0.81
KCNMA1-239ENST00000638531 C11orf95C9JLR9 678 aaPredicted RBP20.09■□□□□ 0.81
KCNMA1-239ENST00000638531 CCDC125Q86Z20 511 aa20.09■□□□□ 0.81
KCNMA1-239ENST00000638531 CARD10Q9BWT7 1032 aa20.09■□□□□ 0.81
KCNMA1-239ENST00000638531 CSB-PGBD3P0DP91 1061 aa20.08■□□□□ 0.81
KCNMA1-239ENST00000638531 KIF24Q5T7B8 1368 aa20.08■□□□□ 0.8
KCNMA1-239ENST00000638531 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
KCNMA1-239ENST00000638531 IP6K1Q92551 441 aa20.07■□□□□ 0.8
KCNMA1-239ENST00000638531 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
KCNMA1-239ENST00000638531 NSD2O96028 1365 aa20.07■□□□□ 0.8
KCNMA1-239ENST00000638531 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
KCNMA1-239ENST00000638531 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
KCNMA1-239ENST00000638531 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
KCNMA1-239ENST00000638531 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
KCNMA1-239ENST00000638531 CDCA7Q9BWT1 371 aaPredicted RBP20.05■□□□□ 0.8
KCNMA1-239ENST00000638531 HOXC9P31274 260 aa20.04■□□□□ 0.8
KCNMA1-239ENST00000638531 FLT4P35916 1363 aa20.04■□□□□ 0.8
KCNMA1-239ENST00000638531 OVOS2A0A0G2JMS6 1433 aa20.03■□□□□ 0.8
KCNMA1-239ENST00000638531 PANK3Q9H999 370 aa20.03■□□□□ 0.8
KCNMA1-239ENST00000638531 RREB1Q92766 1687 aa20.03■□□□□ 0.8
KCNMA1-239ENST00000638531 FBLN1P23142 703 aa20.02■□□□□ 0.8
KCNMA1-239ENST00000638531 AMPHP49418 695 aa20.02■□□□□ 0.8
KCNMA1-239ENST00000638531 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.79
KCNMA1-239ENST00000638531 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
KCNMA1-239ENST00000638531 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
KCNMA1-239ENST00000638531 NHSQ6T4R5 1651 aa20■□□□□ 0.79
KCNMA1-239ENST00000638531 INSRP06213 1382 aa20■□□□□ 0.79
KCNMA1-239ENST00000638531 FAM182BQ5T319 152 aa20■□□□□ 0.79
KCNMA1-239ENST00000638531 FAM196AQ6ZSG2 479 aa20■□□□□ 0.79
KCNMA1-239ENST00000638531 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
KCNMA1-239ENST00000638531 DDB1Q16531 1140 aa19.99■□□□□ 0.79
KCNMA1-239ENST00000638531 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
KCNMA1-239ENST00000638531 SF3B2Q13435 895 aaKnown RBP19.98■□□□□ 0.79
KCNMA1-239ENST00000638531 BCL9O00512 1426 aa19.98■□□□□ 0.79
KCNMA1-239ENST00000638531 WASHC2AQ641Q2 1341 aa19.97■□□□□ 0.79
KCNMA1-239ENST00000638531 NUP188Q5SRE5 1749 aa19.96■□□□□ 0.79
KCNMA1-239ENST00000638531 KAT6BQ8WYB5 2073 aa19.96■□□□□ 0.79
KCNMA1-239ENST00000638531 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
KCNMA1-239ENST00000638531 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
KCNMA1-239ENST00000638531 IL2RBP14784 551 aa19.95■□□□□ 0.78
KCNMA1-239ENST00000638531 LTV1Q96GA3 475 aaPredicted RBP19.95■□□□□ 0.78
KCNMA1-239ENST00000638531 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
KCNMA1-239ENST00000638531 MEGF6O75095 1541 aa19.94■□□□□ 0.78
KCNMA1-239ENST00000638531 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
KCNMA1-239ENST00000638531 BTAF1O14981 1849 aa19.93■□□□□ 0.78
KCNMA1-239ENST00000638531 BAG6P46379 1132 aa19.93■□□□□ 0.78
KCNMA1-239ENST00000638531 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
KCNMA1-239ENST00000638531 DEFB132Q7Z7B7 95 aa19.92■□□□□ 0.78
KCNMA1-239ENST00000638531 EXOC5O00471 708 aa19.91■□□□□ 0.78
KCNMA1-239ENST00000638531 AMER1Q5JTC6 1135 aaPredicted RBP19.91■□□□□ 0.78
KCNMA1-239ENST00000638531 MARCH10Q8NA82 808 aaPredicted RBP19.91■□□□□ 0.78
KCNMA1-239ENST00000638531 TRIM37O94972 964 aa19.9■□□□□ 0.78
KCNMA1-239ENST00000638531 POLKQ9UBT6 870 aa19.9■□□□□ 0.78
KCNMA1-239ENST00000638531 PARD3Q8TEW0 1356 aa19.9■□□□□ 0.78
KCNMA1-239ENST00000638531 NPC1L1Q9UHC9 1359 aa19.89■□□□□ 0.77
KCNMA1-239ENST00000638531 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
KCNMA1-239ENST00000638531 NBPF6Q5VWK0 638 aa19.88■□□□□ 0.77
KCNMA1-239ENST00000638531 NBPF4Q96M43 638 aa19.88■□□□□ 0.77
KCNMA1-239ENST00000638531 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
KCNMA1-239ENST00000638531 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
KCNMA1-239ENST00000638531 TNNT2P45379 298 aaPredicted RBP19.86■□□□□ 0.77
KCNMA1-239ENST00000638531 ITGB4P16144 1822 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms