RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	AKAP12	Q02952	1782 aa		11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	RGPD4	Q7Z3J3	1758 aa		11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	DDB1	Q16531	1140 aa		11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	TOM1L2	Q6ZVM7	507 aa		11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	BCL9	O00512	1426 aa		11.83	□□□□□ -0.52
SPTAN1-238	ENST00000637903	LRRC37A3	O60309	1634 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	ZBTB7C	A1YPR0	619 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	KCNH5	Q8NCM2	988 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	SIN3A	Q96ST3	1273 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	CARD10	Q9BWT7	1032 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	CPSF1	Q10570	1443 aa	Known RBP	11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	TTC21A	Q8NDW8	1320 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	RGPD5	Q99666	1765 aa		11.82	□□□□□ -0.52
SPTAN1-238	ENST00000637903	WNK3	Q9BYP7	1800 aa		11.81	□□□□□ -0.52
SPTAN1-238	ENST00000637903	KCNQ2	O43526	872 aa		11.81	□□□□□ -0.52
SPTAN1-238	ENST00000637903	MARCH10	Q8NA82	808 aa	Predicted RBP	11.81	□□□□□ -0.52
SPTAN1-238	ENST00000637903	SPON1	Q9HCB6	807 aa		11.81	□□□□□ -0.52
SPTAN1-238	ENST00000637903	ROCK2	O75116	1388 aa	Known RBP	11.8	□□□□□ -0.52
SPTAN1-238	ENST00000637903	NEUROD1	Q13562	356 aa		11.8	□□□□□ -0.52
SPTAN1-238	ENST00000637903	PTF1A	Q7RTS3	328 aa		11.8	□□□□□ -0.52
SPTAN1-238	ENST00000637903	PROM2	Q8N271	834 aa		11.8	□□□□□ -0.52
SPTAN1-238	ENST00000637903	NFAT5	O94916	1531 aa		11.79	□□□□□ -0.52
SPTAN1-238	ENST00000637903	ABCC6	O95255	1503 aa		11.78	□□□□□ -0.52
SPTAN1-238	ENST00000637903	KTN1	Q86UP2	1357 aa	Known RBP	11.78	□□□□□ -0.52
SPTAN1-238	ENST00000637903	SBNO2	Q9Y2G9	1366 aa		11.78	□□□□□ -0.52
SPTAN1-238	ENST00000637903	EXOC5	O00471	708 aa		11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	USP31	Q70CQ4	1352 aa		11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	CCDC7	Q96M83	1385 aa		11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	NINL	Q9Y2I6	1382 aa		11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	CASZ1	Q86V15	1759 aa		11.77	□□□□□ -0.53
SPTAN1-238	ENST00000637903	USP54	Q70EL1	1684 aa		11.76	□□□□□ -0.53
SPTAN1-238	ENST00000637903	CSB-PGBD3	P0DP91	1061 aa		11.76	□□□□□ -0.53
SPTAN1-238	ENST00000637903	MON2	Q7Z3U7	1717 aa		11.76	□□□□□ -0.53
SPTAN1-238	ENST00000637903	SOX12	O15370	315 aa		11.75	□□□□□ -0.53
SPTAN1-238	ENST00000637903	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.75	□□□□□ -0.53
SPTAN1-238	ENST00000637903	CD163L1	Q9NR16	1453 aa		11.75	□□□□□ -0.53
SPTAN1-238	ENST00000637903	TXNRD1	Q16881	649 aa		11.74	□□□□□ -0.53
SPTAN1-238	ENST00000637903	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.74	□□□□□ -0.53
SPTAN1-238	ENST00000637903	TONSL	Q96HA7	1378 aa		11.74	□□□□□ -0.53
SPTAN1-238	ENST00000637903	ERBB3	P21860	1342 aa		11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	YY1	P25490	414 aa		11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	PTGER2	P43116	358 aa		11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	TNS2	Q63HR2	1409 aa		11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	PUS7	Q96PZ0	661 aa	Known RBP	11.73	□□□□□ -0.53
SPTAN1-238	ENST00000637903	SLC15A2	Q16348	729 aa		11.72	□□□□□ -0.53
SPTAN1-238	ENST00000637903	NME9	Q86XW9	330 aa		11.72	□□□□□ -0.53
SPTAN1-238	ENST00000637903	DCAF8L1	A6NGE4	600 aa		11.71	□□□□□ -0.53
SPTAN1-238	ENST00000637903	CARD11	Q9BXL7	1154 aa		11.71	□□□□□ -0.53
SPTAN1-238	ENST00000637903	SLC12A5	Q9H2X9	1139 aa		11.71	□□□□□ -0.53
SPTAN1-238	ENST00000637903	STK32B	Q9NY57	414 aa		11.71	□□□□□ -0.53
SPTAN1-238	ENST00000637903	TIMELESS	Q9UNS1	1208 aa		11.71	□□□□□ -0.53
SPTAN1-238	ENST00000637903	LTN1	O94822	1766 aa		11.71	□□□□□ -0.54
SPTAN1-238	ENST00000637903	NHS	Q6T4R5	1651 aa		11.71	□□□□□ -0.54
SPTAN1-238	ENST00000637903	KAT6B	Q8WYB5	2073 aa		11.71	□□□□□ -0.54
SPTAN1-238	ENST00000637903	EDC4	Q6P2E9	1401 aa	Known RBP	11.7	□□□□□ -0.54
SPTAN1-238	ENST00000637903	ZBTB7A	O95365	584 aa		11.7	□□□□□ -0.54
SPTAN1-238	ENST00000637903	IL2RB	P14784	551 aa		11.7	□□□□□ -0.54
SPTAN1-238	ENST00000637903	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.7	□□□□□ -0.54
SPTAN1-238	ENST00000637903	NLRP2	Q9NX02	1062 aa		11.7	□□□□□ -0.54
SPTAN1-238	ENST00000637903	UTRN	P46939	3433 aa		11.69	□□□□□ -0.54
SPTAN1-238	ENST00000637903	TMC1	Q8TDI8	760 aa		11.69	□□□□□ -0.54
SPTAN1-238	ENST00000637903	ANKRD24	Q8TF21	1146 aa		11.69	□□□□□ -0.54
SPTAN1-238	ENST00000637903	SGIP1	Q9BQI5	828 aa		11.69	□□□□□ -0.54
SPTAN1-238	ENST00000637903	ZEB1	P37275	1124 aa	Predicted RBP	11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	IP6K1	Q92551	441 aa		11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	ACSBG1	Q96GR2	724 aa		11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	MTFR1L	Q9H019	292 aa		11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	TERF2IP	Q9NYB0	399 aa		11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903	MYOM1	P52179	1685 aa		11.68	□□□□□ -0.54
SPTAN1-238	ENST00000637903		A0A1W2PP64	1363 aa		11.67	□□□□□ -0.54
SPTAN1-238	ENST00000637903	PAPPA	Q13219	1627 aa		11.67	□□□□□ -0.54
SPTAN1-238	ENST00000637903	BTAF1	O14981	1849 aa		11.67	□□□□□ -0.54
SPTAN1-238	ENST00000637903	SYT17	Q9BSW7	474 aa		11.66	□□□□□ -0.54
SPTAN1-238	ENST00000637903	TESK2	Q96S53	571 aa		11.65	□□□□□ -0.54
SPTAN1-238	ENST00000637903	LRRC4B	Q9NT99	713 aa		11.65	□□□□□ -0.54
SPTAN1-238	ENST00000637903	SLC24A1	O60721	1099 aa		11.64	□□□□□ -0.55
SPTAN1-238	ENST00000637903	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.64	□□□□□ -0.55
SPTAN1-238	ENST00000637903	FAM208A	Q9UK61	1670 aa	Known RBP	11.64	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ZNF827	Q17R98	1081 aa		11.63	□□□□□ -0.55
SPTAN1-238	ENST00000637903	SLC27A3	Q5K4L6	730 aa		11.63	□□□□□ -0.55
SPTAN1-238	ENST00000637903	AKT1S1	Q96B36	256 aa		11.63	□□□□□ -0.55
SPTAN1-238	ENST00000637903	MAP3K5	Q99683	1374 aa		11.63	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ST20-MTHFS	A0A0A6YYL1	179 aa		11.62	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ARX	Q96QS3	562 aa		11.62	□□□□□ -0.55
SPTAN1-238	ENST00000637903	QSER1	Q2KHR3	1735 aa		11.62	□□□□□ -0.55
SPTAN1-238	ENST00000637903	CHD4	Q14839	1912 aa		11.62	□□□□□ -0.55
SPTAN1-238	ENST00000637903	MAP3K19	Q56UN5	1328 aa		11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	HOXC9	P31274	260 aa		11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	DDX54	Q8TDD1	881 aa	Known RBP	11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	SLC16A10	Q8TF71	515 aa		11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	LTV1	Q96GA3	475 aa	Predicted RBP	11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	COG3	Q96JB2	828 aa		11.61	□□□□□ -0.55
SPTAN1-238	ENST00000637903	COL24A1	Q17RW2	1714 aa		11.6	□□□□□ -0.55
SPTAN1-238	ENST00000637903	FBLN1	P23142	703 aa		11.6	□□□□□ -0.55

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