RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
SMARCA2-260ENST00000637352 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.49
SMARCA2-260ENST00000637352 SYT17Q9BSW7 474 aa11.96□□□□□ -0.49
SMARCA2-260ENST00000637352 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-260ENST00000637352 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-260ENST00000637352 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-260ENST00000637352 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
SMARCA2-260ENST00000637352 STAC3Q96MF2 364 aa11.95□□□□□ -0.5
SMARCA2-260ENST00000637352 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 MYOM1P52179 1685 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 EXOC5O00471 708 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
SMARCA2-260ENST00000637352 USP6P35125 1406 aa11.93□□□□□ -0.5
SMARCA2-260ENST00000637352 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
SMARCA2-260ENST00000637352 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
SMARCA2-260ENST00000637352 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-260ENST00000637352 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
SMARCA2-260ENST00000637352 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
SMARCA2-260ENST00000637352 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 C1QTNF8P60827 252 aa11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 ARXQ96QS3 562 aa11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 SLIT3O75094 1523 aa11.9□□□□□ -0.5
SMARCA2-260ENST00000637352 GPR162Q16538 588 aa11.89□□□□□ -0.51
SMARCA2-260ENST00000637352 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
SMARCA2-260ENST00000637352 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
SMARCA2-260ENST00000637352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCA2-260ENST00000637352 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
SMARCA2-260ENST00000637352 NLRP2Q9NX02 1062 aa11.88□□□□□ -0.51
SMARCA2-260ENST00000637352 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 COL18A1P39060 1754 aa11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 KCNQ4P56696 695 aa11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
SMARCA2-260ENST00000637352 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
SMARCA2-260ENST00000637352 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
SMARCA2-260ENST00000637352 BCL9O00512 1426 aa11.86□□□□□ -0.51
SMARCA2-260ENST00000637352 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
SMARCA2-260ENST00000637352 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.51
SMARCA2-260ENST00000637352 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 IL2RBP14784 551 aa11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 NME9Q86XW9 330 aa11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 NLGN2Q8NFZ4 835 aa11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
SMARCA2-260ENST00000637352 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
SMARCA2-260ENST00000637352 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
SMARCA2-260ENST00000637352 TTC21AQ8NDW8 1320 aa11.82□□□□□ -0.52
SMARCA2-260ENST00000637352 POLD1P28340 1107 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 TMC1Q8TDI8 760 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 ERBB3P21860 1342 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 NFAT5O94916 1531 aa11.81□□□□□ -0.52
SMARCA2-260ENST00000637352 MSH5O43196 834 aa11.8□□□□□ -0.52
SMARCA2-260ENST00000637352 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
SMARCA2-260ENST00000637352 TFCP2L1Q9NZI6 479 aa11.8□□□□□ -0.52
SMARCA2-260ENST00000637352 PNPLA7Q6ZV29 1317 aa11.8□□□□□ -0.52
SMARCA2-260ENST00000637352 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
SMARCA2-260ENST00000637352 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 KAT6BQ8WYB5 2073 aa11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 PAPPAQ13219 1627 aa11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
SMARCA2-260ENST00000637352 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 FBLN1P23142 703 aa11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.53
SMARCA2-260ENST00000637352 BTAF1O14981 1849 aa11.76□□□□□ -0.53
SMARCA2-260ENST00000637352 ABCC6O95255 1503 aa11.76□□□□□ -0.53
SMARCA2-260ENST00000637352 CHD4Q14839 1912 aa11.76□□□□□ -0.53
SMARCA2-260ENST00000637352 SLC12A5Q9H2X9 1139 aa11.76□□□□□ -0.53
SMARCA2-260ENST00000637352 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
SMARCA2-260ENST00000637352 ZNF526Q8TF50 670 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-260ENST00000637352 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
SMARCA2-260ENST00000637352 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-260ENST00000637352 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-260ENST00000637352 CCNL1Q9UK58 526 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-260ENST00000637352 USP31Q70CQ4 1352 aa11.74□□□□□ -0.53
SMARCA2-260ENST00000637352 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
SMARCA2-260ENST00000637352 CD163L1Q9NR16 1453 aa11.72□□□□□ -0.53
SMARCA2-260ENST00000637352 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
SMARCA2-260ENST00000637352 IP6K1Q92551 441 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms