RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 SPATA31A7Q8IWB4 1347 aa15.52■□□□□ 0.08
SRP54-AS1-205ENST00000636540 FAM208AQ9UK61 1670 aaKnown RBP15.51■□□□□ 0.07
SRP54-AS1-205ENST00000636540 KCNH5Q8NCM2 988 aa15.51■□□□□ 0.07
SRP54-AS1-205ENST00000636540 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
SRP54-AS1-205ENST00000636540 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
SRP54-AS1-205ENST00000636540 LRRC37A3O60309 1634 aa15.5■□□□□ 0.07
SRP54-AS1-205ENST00000636540 SPATA31A1Q5TZJ5 1347 aa15.49■□□□□ 0.07
SRP54-AS1-205ENST00000636540 ARHGEF25Q86VW2 580 aa15.49■□□□□ 0.07
SRP54-AS1-205ENST00000636540 NSD3Q9BZ95 1437 aa15.49■□□□□ 0.07
SRP54-AS1-205ENST00000636540 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
SRP54-AS1-205ENST00000636540 STRN4Q9NRL3 753 aa15.48■□□□□ 0.07
SRP54-AS1-205ENST00000636540 CRB1P82279 1406 aa15.48■□□□□ 0.07
SRP54-AS1-205ENST00000636540 SOX12O15370 315 aa15.47■□□□□ 0.07
SRP54-AS1-205ENST00000636540 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
SRP54-AS1-205ENST00000636540 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.07
SRP54-AS1-205ENST00000636540 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
SRP54-AS1-205ENST00000636540 FAM98CQ17RN3 349 aaKnown RBP15.46■□□□□ 0.07
SRP54-AS1-205ENST00000636540 LARP1Q6PKG0 1096 aaKnown RBP15.46■□□□□ 0.07
SRP54-AS1-205ENST00000636540 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
SRP54-AS1-205ENST00000636540 RGPD1P0DJD0 1748 aa15.45■□□□□ 0.06
SRP54-AS1-205ENST00000636540 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
SRP54-AS1-205ENST00000636540 TNS1Q9HBL0 1735 aaKnown RBP15.45■□□□□ 0.06
SRP54-AS1-205ENST00000636540 BLMP54132 1417 aaPredicted RBP15.44■□□□□ 0.06
SRP54-AS1-205ENST00000636540 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SRP54-AS1-205ENST00000636540 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
SRP54-AS1-205ENST00000636540 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 EVA1CP58658 441 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 COG3Q96JB2 828 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
SRP54-AS1-205ENST00000636540 RGPD2P0DJD1 1756 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 A0A0G2JS52 829 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 FYB1O15117 783 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 MYT1Q01538 1121 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 ERBB3P21860 1342 aa15.41■□□□□ 0.06
SRP54-AS1-205ENST00000636540 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
SRP54-AS1-205ENST00000636540 KRT27Q7Z3Y8 459 aa15.4■□□□□ 0.06
SRP54-AS1-205ENST00000636540 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
SRP54-AS1-205ENST00000636540 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
SRP54-AS1-205ENST00000636540 THRAP3Q9Y2W1 955 aaKnown RBP15.4■□□□□ 0.06
SRP54-AS1-205ENST00000636540 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
SRP54-AS1-205ENST00000636540 KIF7Q2M1P5 1343 aa15.39■□□□□ 0.05
SRP54-AS1-205ENST00000636540 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
SRP54-AS1-205ENST00000636540 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
SRP54-AS1-205ENST00000636540 SBF2Q86WG5 1849 aa15.38■□□□□ 0.05
SRP54-AS1-205ENST00000636540 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
SRP54-AS1-205ENST00000636540 TOM1L2Q6ZVM7 507 aa15.37■□□□□ 0.05
SRP54-AS1-205ENST00000636540 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
SRP54-AS1-205ENST00000636540 TNS2Q63HR2 1409 aa15.36■□□□□ 0.05
SRP54-AS1-205ENST00000636540 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
SRP54-AS1-205ENST00000636540 SHANK3Q9BYB0 1731 aa15.36■□□□□ 0.05
SRP54-AS1-205ENST00000636540 CSB-PGBD3P0DP91 1061 aa15.35■□□□□ 0.05
SRP54-AS1-205ENST00000636540 CARD10Q9BWT7 1032 aa15.35■□□□□ 0.05
SRP54-AS1-205ENST00000636540 NSD2O96028 1365 aa15.35■□□□□ 0.05
SRP54-AS1-205ENST00000636540 KIF24Q5T7B8 1368 aa15.35■□□□□ 0.05
SRP54-AS1-205ENST00000636540 FBLN1P23142 703 aa15.34■□□□□ 0.05
SRP54-AS1-205ENST00000636540 HOXC9P31274 260 aa15.34■□□□□ 0.05
SRP54-AS1-205ENST00000636540 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
SRP54-AS1-205ENST00000636540 IP6K1Q92551 441 aa15.34■□□□□ 0.05
SRP54-AS1-205ENST00000636540 FLT4P35916 1363 aa15.34■□□□□ 0.05
SRP54-AS1-205ENST00000636540 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
SRP54-AS1-205ENST00000636540 PANK3Q9H999 370 aa15.33■□□□□ 0.04
SRP54-AS1-205ENST00000636540 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.04
SRP54-AS1-205ENST00000636540 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.04
SRP54-AS1-205ENST00000636540 RREB1Q92766 1687 aa15.32■□□□□ 0.04
SRP54-AS1-205ENST00000636540 RGPD3A6NKT7 1758 aaPredicted RBP15.32■□□□□ 0.04
SRP54-AS1-205ENST00000636540 RGPD4Q7Z3J3 1758 aa15.32■□□□□ 0.04
SRP54-AS1-205ENST00000636540 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
SRP54-AS1-205ENST00000636540 CCDC125Q86Z20 511 aa15.32■□□□□ 0.04
SRP54-AS1-205ENST00000636540 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
SRP54-AS1-205ENST00000636540 INSRP06213 1382 aa15.3■□□□□ 0.04
SRP54-AS1-205ENST00000636540 AMPHP49418 695 aa15.3■□□□□ 0.04
SRP54-AS1-205ENST00000636540 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
SRP54-AS1-205ENST00000636540 MEGF6O75095 1541 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 BCL9O00512 1426 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 PKD1L3Q7Z443 1732 aa15.29■□□□□ 0.04
SRP54-AS1-205ENST00000636540 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
SRP54-AS1-205ENST00000636540 DDB1Q16531 1140 aa15.28■□□□□ 0.04
SRP54-AS1-205ENST00000636540 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
SRP54-AS1-205ENST00000636540 NUP188Q5SRE5 1749 aa15.28■□□□□ 0.04
SRP54-AS1-205ENST00000636540 FAM196AQ6ZSG2 479 aa15.27■□□□□ 0.04
SRP54-AS1-205ENST00000636540 LTV1Q96GA3 475 aaPredicted RBP15.27■□□□□ 0.04
SRP54-AS1-205ENST00000636540 DOT1LQ8TEK3 1739 aa15.26■□□□□ 0.03
SRP54-AS1-205ENST00000636540 IL2RBP14784 551 aa15.25■□□□□ 0.03
SRP54-AS1-205ENST00000636540 SF3B2Q13435 895 aaKnown RBP15.25■□□□□ 0.03
SRP54-AS1-205ENST00000636540 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
SRP54-AS1-205ENST00000636540 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
SRP54-AS1-205ENST00000636540 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
SRP54-AS1-205ENST00000636540 KNSTRNQ9Y448 316 aa15.24■□□□□ 0.03
SRP54-AS1-205ENST00000636540 BTAF1O14981 1849 aa15.23■□□□□ 0.03
SRP54-AS1-205ENST00000636540 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
SRP54-AS1-205ENST00000636540 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
SRP54-AS1-205ENST00000636540 TRIM37O94972 964 aa15.22■□□□□ 0.03
SRP54-AS1-205ENST00000636540 BAG6P46379 1132 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms