RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 ARHGEF25Q86VW2 580 aa26.39■■□□□ 1.82
CLN8-208ENST00000635751 INSRP06213 1382 aa26.39■■□□□ 1.82
CLN8-208ENST00000635751 PPP4R2Q9NY27 417 aa26.39■■□□□ 1.81
CLN8-208ENST00000635751 HAP1P54257 671 aaPredicted RBP26.38■■□□□ 1.81
CLN8-208ENST00000635751 HSP90AB2PQ58FF8 381 aa26.38■■□□□ 1.81
CLN8-208ENST00000635751 RGPD5Q99666 1765 aa26.38■■□□□ 1.81
CLN8-208ENST00000635751 FLT4P35916 1363 aa26.37■■□□□ 1.81
CLN8-208ENST00000635751 DIAPH1O60610 1272 aaKnown RBP26.36■■□□□ 1.81
CLN8-208ENST00000635751 HOXC9P31274 260 aa26.36■■□□□ 1.81
CLN8-208ENST00000635751 KIF24Q5T7B8 1368 aa26.35■■□□□ 1.81
CLN8-208ENST00000635751 WDR43Q15061 677 aaKnown RBP eCLIP26.35■■□□□ 1.81
CLN8-208ENST00000635751 IP6K1Q92551 441 aa26.34■■□□□ 1.81
CLN8-208ENST00000635751 HSPA1LP34931 641 aa26.33■■□□□ 1.81
CLN8-208ENST00000635751 RTL1A6NKG5 1358 aa26.33■■□□□ 1.81
CLN8-208ENST00000635751 KIAA0232Q92628 1395 aa26.33■■□□□ 1.81
CLN8-208ENST00000635751 ADAMTS8Q9UP79 889 aa26.32■■□□□ 1.8
CLN8-208ENST00000635751 COL18A1P39060 1754 aa26.32■■□□□ 1.8
CLN8-208ENST00000635751 IL13P35225 146 aa26.31■■□□□ 1.8
CLN8-208ENST00000635751 EIF4A2Q14240 407 aaKnown RBP26.31■■□□□ 1.8
CLN8-208ENST00000635751 CPDO75976 1380 aa26.31■■□□□ 1.8
CLN8-208ENST00000635751 U2SURPO15042 1029 aaKnown RBP26.3■■□□□ 1.8
CLN8-208ENST00000635751 CHRNA2Q15822 529 aa26.3■■□□□ 1.8
CLN8-208ENST00000635751 AXIN2Q9Y2T1 843 aa26.29■■□□□ 1.8
CLN8-208ENST00000635751 RNF123Q5XPI4 1314 aa26.29■■□□□ 1.8
CLN8-208ENST00000635751 JCADQ9P266 1359 aa26.28■■□□□ 1.8
CLN8-208ENST00000635751 U2AF1L5P0DN76 240 aaPredicted RBP26.28■■□□□ 1.8
CLN8-208ENST00000635751 U2AF1Q01081 240 aaKnown RBP eCLIP26.28■■□□□ 1.8
CLN8-208ENST00000635751 LTV1Q96GA3 475 aaPredicted RBP26.28■■□□□ 1.8
CLN8-208ENST00000635751 PRDM11Q9NQV5 511 aa26.28■■□□□ 1.8
CLN8-208ENST00000635751 RGPD2P0DJD1 1756 aa26.26■■□□□ 1.79
CLN8-208ENST00000635751 NUTM2BA6NNL0 878 aaPredicted RBP26.25■■□□□ 1.79
CLN8-208ENST00000635751 NUTM2EB1AL46 878 aaPredicted RBP26.25■■□□□ 1.79
CLN8-208ENST00000635751 NUTM2AQ8IVF1 878 aaPredicted RBP26.25■■□□□ 1.79
CLN8-208ENST00000635751 BLMP54132 1417 aaPredicted RBP26.24■■□□□ 1.79
CLN8-208ENST00000635751 RGPD1P0DJD0 1748 aa26.23■■□□□ 1.79
CLN8-208ENST00000635751 FAM83GA6ND36 823 aa26.23■■□□□ 1.79
CLN8-208ENST00000635751 ABCC6O95255 1503 aa26.22■■□□□ 1.79
CLN8-208ENST00000635751 LMO7Q8WWI1 1683 aa26.22■■□□□ 1.79
CLN8-208ENST00000635751 ADAMTS2O95450 1211 aa26.21■■□□□ 1.79
CLN8-208ENST00000635751 ANKRD24Q8TF21 1146 aa26.21■■□□□ 1.79
CLN8-208ENST00000635751 SENP3-EIF4A1A0A087X0R7 540 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 HMOX1P09601 288 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 CCDC146Q8IYE0 955 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 EYA1Q99502 592 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 CAMTA1Q9Y6Y1 1673 aa26.2■■□□□ 1.78
CLN8-208ENST00000635751 COL14A1Q05707 1796 aaKnown RBP26.19■■□□□ 1.78
CLN8-208ENST00000635751 ERBB3P21860 1342 aa26.17■■□□□ 1.78
CLN8-208ENST00000635751 SPATA31A6Q5VVP1 1343 aa26.16■■□□□ 1.78
CLN8-208ENST00000635751 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
CLN8-208ENST00000635751 RBM19Q9Y4C8 960 aaKnown RBP26.16■■□□□ 1.78
CLN8-208ENST00000635751 IGSF1Q8N6C5 1336 aa26.15■■□□□ 1.78
CLN8-208ENST00000635751 FCHSD2O94868 740 aa26.15■■□□□ 1.78
CLN8-208ENST00000635751 NBPF6Q5VWK0 638 aa26.15■■□□□ 1.78
CLN8-208ENST00000635751 AEBP1Q8IUX7 1158 aa26.15■■□□□ 1.78
CLN8-208ENST00000635751 NBPF4Q96M43 638 aa26.15■■□□□ 1.78
CLN8-208ENST00000635751 RSPH6AQ9H0K4 717 aa26.14■■□□□ 1.78
CLN8-208ENST00000635751 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.77
CLN8-208ENST00000635751 BTG4Q9NY30 223 aa26.14■■□□□ 1.77
CLN8-208ENST00000635751 FAM208AQ9UK61 1670 aaKnown RBP26.13■■□□□ 1.77
CLN8-208ENST00000635751 CSB-PGBD3P0DP91 1061 aa26.13■■□□□ 1.77
CLN8-208ENST00000635751 B4GALNT3Q6L9W6 998 aa26.13■■□□□ 1.77
CLN8-208ENST00000635751 USHBP1Q8N6Y0 703 aa26.13■■□□□ 1.77
CLN8-208ENST00000635751 FBXO41Q8TF61 875 aa26.13■■□□□ 1.77
CLN8-208ENST00000635751 PRKAR2BP31323 418 aa26.12■■□□□ 1.77
CLN8-208ENST00000635751 RUNDC1Q96C34 613 aa26.12■■□□□ 1.77
CLN8-208ENST00000635751 PLEKHF1Q96S99 279 aa26.12■■□□□ 1.77
CLN8-208ENST00000635751 COL5A2P05997 1499 aaPredicted RBP26.12■■□□□ 1.77
CLN8-208ENST00000635751 LRP6O75581 1613 aa26.11■■□□□ 1.77
CLN8-208ENST00000635751 PNNQ9H307 717 aaKnown RBP26.11■■□□□ 1.77
CLN8-208ENST00000635751 EVA1CP58658 441 aa26.1■■□□□ 1.77
CLN8-208ENST00000635751 STRN4Q9NRL3 753 aa26.1■■□□□ 1.77
CLN8-208ENST00000635751 NLRP2Q9NX02 1062 aa26.1■■□□□ 1.77
CLN8-208ENST00000635751 KDRP35968 1356 aa26.09■■□□□ 1.77
CLN8-208ENST00000635751 APAF1O14727 1248 aa26.09■■□□□ 1.77
CLN8-208ENST00000635751 WDR17Q8IZU2 1322 aa26.08■■□□□ 1.77
CLN8-208ENST00000635751 SALL2Q9Y467 1007 aaPredicted RBP26.07■■□□□ 1.76
CLN8-208ENST00000635751 NWD2Q9ULI1 1742 aa26.06■■□□□ 1.76
CLN8-208ENST00000635751 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
CLN8-208ENST00000635751 PHACTR3Q96KR7 559 aa26.06■■□□□ 1.76
CLN8-208ENST00000635751 C8orf37Q96NL8 207 aa26.06■■□□□ 1.76
CLN8-208ENST00000635751 MAPK8IP3Q9UPT6 1336 aa26.06■■□□□ 1.76
CLN8-208ENST00000635751 LARP1Q6PKG0 1096 aaKnown RBP26.05■■□□□ 1.76
CLN8-208ENST00000635751 TOM1L2Q6ZVM7 507 aa26.05■■□□□ 1.76
CLN8-208ENST00000635751 NRAPQ86VF7 1730 aa26.05■■□□□ 1.76
CLN8-208ENST00000635751 NEFMP07197 916 aa26.04■■□□□ 1.76
CLN8-208ENST00000635751 RCAN3Q9UKA8 241 aa26.04■■□□□ 1.76
CLN8-208ENST00000635751 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
CLN8-208ENST00000635751 NGLY1Q96IV0 654 aa26.04■■□□□ 1.76
CLN8-208ENST00000635751 RRP1P56182 461 aaKnown RBP26.03■■□□□ 1.76
CLN8-208ENST00000635751 RRP7AQ9Y3A4 280 aaKnown RBP26.02■■□□□ 1.76
CLN8-208ENST00000635751 DLG5Q8TDM6 1919 aa26.02■■□□□ 1.76
CLN8-208ENST00000635751 SLIT2O94813 1529 aa26.02■■□□□ 1.76
CLN8-208ENST00000635751 NEUROD2Q15784 382 aa26.02■■□□□ 1.76
CLN8-208ENST00000635751 MEX3CQ5U5Q3 659 aaKnown RBP26.02■■□□□ 1.76
CLN8-208ENST00000635751 CARD10Q9BWT7 1032 aa26■■□□□ 1.75
CLN8-208ENST00000635751 CRB1P82279 1406 aa25.99■■□□□ 1.75
CLN8-208ENST00000635751 TMPOP42166 694 aaKnown RBP25.99■■□□□ 1.75
CLN8-208ENST00000635751 CDCA7LQ96GN5 454 aa25.98■■□□□ 1.75
CLN8-208ENST00000635751 CCDC136Q96JN2 1154 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms