RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SOS2Q07890 1332 aaPredicted RBP5.51□□□□□ -1.53
PSPC1-208ENST00000635562 DHX9Q08211 1270 aaKnown RBP5.51□□□□□ -1.53
PSPC1-208ENST00000635562 QPCTQ16769 361 aa5.51□□□□□ -1.53
PSPC1-208ENST00000635562 IL27Q8NEV9 243 aa5.51□□□□□ -1.53
PSPC1-208ENST00000635562 TRIM52Q96A61 297 aa5.51□□□□□ -1.53
PSPC1-208ENST00000635562 DDRGK1Q96HY6 314 aa5.51□□□□□ -1.53
PSPC1-208ENST00000635562 MAGEB6P1A0A0J9YX57 407 aa5.5□□□□□ -1.53
PSPC1-208ENST00000635562 PPFIA3O75145 1194 aa5.5□□□□□ -1.53
PSPC1-208ENST00000635562 PDXDC2PQ6P474 469 aa5.5□□□□□ -1.53
PSPC1-208ENST00000635562 PNMA1Q8ND90 353 aa5.5□□□□□ -1.53
PSPC1-208ENST00000635562 RNF225M0QZC1 329 aaPredicted RBP5.49□□□□□ -1.53
PSPC1-208ENST00000635562 SLC10A4Q96EP9 437 aa5.49□□□□□ -1.53
PSPC1-208ENST00000635562 TIMELESSQ9UNS1 1208 aa5.49□□□□□ -1.53
PSPC1-208ENST00000635562 TTLL8A6PVC2 850 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 SOBPA7XYQ1 873 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 ERFEQ4G0M1 354 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 Q6ZVU0 165 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 ARHGAP9Q9BRR9 750 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 GOPCQ9HD26 462 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 FKBPLQ9UIM3 349 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 DNMT3LQ9UJW3 386 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 GPSM3Q9Y4H4 160 aa5.48□□□□□ -1.53
PSPC1-208ENST00000635562 NBPF20Q3BBV1 942 aa5.47□□□□□ -1.53
PSPC1-208ENST00000635562 RTL5Q5HYW3 569 aaPredicted RBP5.47□□□□□ -1.53
PSPC1-208ENST00000635562 CARD14Q9BXL6 1004 aa5.47□□□□□ -1.53
PSPC1-208ENST00000635562 SPINT1O43278 529 aa5.46□□□□□ -1.54
PSPC1-208ENST00000635562 PTK2Q05397 1052 aa5.46□□□□□ -1.54
PSPC1-208ENST00000635562 PPP1R26Q5T8A7 1209 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-208ENST00000635562 ZBTB33Q86T24 672 aa5.46□□□□□ -1.54
PSPC1-208ENST00000635562 NANOS1Q8WY41 292 aaKnown RBP5.46□□□□□ -1.54
PSPC1-208ENST00000635562 KCTD15Q96SI1 283 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-208ENST00000635562 PTSQ03393 145 aa5.45□□□□□ -1.54
PSPC1-208ENST00000635562 KCNMA1Q12791 1236 aa5.45□□□□□ -1.54
PSPC1-208ENST00000635562 SKIV2LQ15477 1246 aaKnown RBP5.45□□□□□ -1.54
PSPC1-208ENST00000635562 CTDSPL2Q05D32 466 aa5.44□□□□□ -1.54
PSPC1-208ENST00000635562 SH3D19Q5HYK7 790 aa5.44□□□□□ -1.54
PSPC1-208ENST00000635562 PPP2R2DQ66LE6 453 aa5.44□□□□□ -1.54
PSPC1-208ENST00000635562 ERICH6Q7L0X2 663 aa5.44□□□□□ -1.54
PSPC1-208ENST00000635562 POLR3EQ9NVU0 708 aa5.44□□□□□ -1.54
PSPC1-208ENST00000635562 CCDC155Q8N6L0 562 aa5.43□□□□□ -1.54
PSPC1-208ENST00000635562 CCDC125Q86Z20 511 aa5.42□□□□□ -1.54
PSPC1-208ENST00000635562 SLC35F4A4IF30 521 aa5.41□□□□□ -1.54
PSPC1-208ENST00000635562 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.41□□□□□ -1.54
PSPC1-208ENST00000635562 ITGA6P23229 1130 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 CBLBQ13191 982 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 INTS6LQ5JSJ4 861 aaKnown RBP5.4□□□□□ -1.54
PSPC1-208ENST00000635562 SV2AQ7L0J3 742 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 SEPT12Q8IYM1 358 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 TMEM151AQ8N4L1 468 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 LRRN4Q8WUT4 740 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 ZNF592Q92610 1267 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 CNTNAP3BQ96NU0 1288 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 COL25A1Q9BXS0 654 aaPredicted RBP5.4□□□□□ -1.54
PSPC1-208ENST00000635562 CNTNAP3Q9BZ76 1288 aa5.4□□□□□ -1.54
PSPC1-208ENST00000635562 ATP1B4Q9UN42 357 aaPredicted RBP5.4□□□□□ -1.54
PSPC1-208ENST00000635562 FIGNL2A6NMB9 653 aa5.39□□□□□ -1.55
PSPC1-208ENST00000635562 SLURP2P0DP57 97 aa5.39□□□□□ -1.55
PSPC1-208ENST00000635562 NR6A1Q15406 480 aa5.39□□□□□ -1.55
PSPC1-208ENST00000635562 ADAM32Q8TC27 787 aa5.39□□□□□ -1.55
PSPC1-208ENST00000635562 POLMQ9NP87 494 aaPredicted RBP5.39□□□□□ -1.55
PSPC1-208ENST00000635562 ADH1AP07327 375 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 RELBQ01201 579 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 KRT76Q01546 638 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 DZIP3Q86Y13 1208 aaKnown RBP5.38□□□□□ -1.55
PSPC1-208ENST00000635562 SVOPQ8N4V2 548 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 RNF217Q8TC41 542 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 GMCL1Q96IK5 515 aa5.38□□□□□ -1.55
PSPC1-208ENST00000635562 PCMTD1Q96MG8 357 aaPredicted RBP5.38□□□□□ -1.55
PSPC1-208ENST00000635562 AP1G2O75843 785 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 GDF11O95390 407 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 CTSOP43234 321 aaPredicted RBP5.37□□□□□ -1.55
PSPC1-208ENST00000635562 RASSF7Q02833 373 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 KANK3Q6NY19 840 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 C14orf37Q86TY3 774 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 GPR161Q8N6U8 529 aaKnown RBP5.37□□□□□ -1.55
PSPC1-208ENST00000635562 INSM2Q96T92 566 aaPredicted RBP5.37□□□□□ -1.55
PSPC1-208ENST00000635562 ADAMTS8Q9UP79 889 aa5.37□□□□□ -1.55
PSPC1-208ENST00000635562 CDC14CA4D256 554 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 ESPNB1AK53 854 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 USP17L8P0C7I0 530 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 FOXK2Q01167 660 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 ZNF784Q8NCA9 323 aaPredicted RBP5.36□□□□□ -1.55
PSPC1-208ENST00000635562 PROCA1Q8NCQ7 364 aaPredicted RBP5.36□□□□□ -1.55
PSPC1-208ENST00000635562 SCARF2Q96GP6 870 aaPredicted RBP5.36□□□□□ -1.55
PSPC1-208ENST00000635562 ARXQ96QS3 562 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 OCSTAMPQ9BR26 566 aa5.36□□□□□ -1.55
PSPC1-208ENST00000635562 IGHA1P01876 353 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 PTGIRP43119 386 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 MAP3K10Q02779 954 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 SRSF11Q05519 484 aaKnown RBP5.35□□□□□ -1.55
PSPC1-208ENST00000635562 FBXO31Q5XUX0 539 aaPredicted RBP5.35□□□□□ -1.55
PSPC1-208ENST00000635562 ZNF385CQ66K41 422 aaPredicted RBP5.35□□□□□ -1.55
PSPC1-208ENST00000635562 FOXR1Q6PIV2 292 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 LYSMD3Q7Z3D4 306 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 VWA5B2Q8N398 1253 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 AGBL1Q96MI9 1066 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 ENAMQ9NRM1 1142 aa5.35□□□□□ -1.55
PSPC1-208ENST00000635562 DNMT3AQ9Y6K1 912 aaPredicted RBP5.35□□□□□ -1.55
PSPC1-208ENST00000635562 ERVH48-1M5A8F1 160 aa5.34□□□□□ -1.55
PSPC1-208ENST00000635562 GPC1P35052 558 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms