RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
CHD2-219ENST00000630016 FKBPLQ9UIM3 349 aa8.55□□□□□ -1.04
CHD2-219ENST00000630016 DNMT3LQ9UJW3 386 aa8.55□□□□□ -1.04
CHD2-219ENST00000630016 ATP1B4Q9UN42 357 aaPredicted RBP8.55□□□□□ -1.04
CHD2-219ENST00000630016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.041e-7■■□□□ 13.6
CHD2-219ENST00000630016 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
CHD2-219ENST00000630016 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
CHD2-219ENST00000630016 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
CHD2-219ENST00000630016 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
CHD2-219ENST00000630016 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
CHD2-219ENST00000630016 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
CHD2-219ENST00000630016 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
CHD2-219ENST00000630016 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
CHD2-219ENST00000630016 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
CHD2-219ENST00000630016 PTK2Q05397 1052 aa8.5□□□□□ -1.05
CHD2-219ENST00000630016 CBLBQ13191 982 aa8.5□□□□□ -1.05
CHD2-219ENST00000630016 NR6A1Q15406 480 aa8.5□□□□□ -1.05
CHD2-219ENST00000630016 Q6ZVU0 165 aa8.5□□□□□ -1.05
CHD2-219ENST00000630016 PNMA1Q8ND90 353 aa8.5□□□□□ -1.05
CHD2-219ENST00000630016 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
CHD2-219ENST00000630016 GPSM3Q9Y4H4 160 aa8.49□□□□□ -1.05
CHD2-219ENST00000630016 SPINT1O43278 529 aa8.48□□□□□ -1.05
CHD2-219ENST00000630016 PTSQ03393 145 aa8.48□□□□□ -1.05
CHD2-219ENST00000630016 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
CHD2-219ENST00000630016 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
CHD2-219ENST00000630016 KDM4CQ9H3R0 1056 aa8.48□□□□□ -1.05
CHD2-219ENST00000630016 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
CHD2-219ENST00000630016 AP1G2O75843 785 aa8.47□□□□□ -1.05
CHD2-219ENST00000630016 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
CHD2-219ENST00000630016 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
CHD2-219ENST00000630016 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
CHD2-219ENST00000630016 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
CHD2-219ENST00000630016 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
CHD2-219ENST00000630016 RELBQ01201 579 aa8.44□□□□□ -1.06
CHD2-219ENST00000630016 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
CHD2-219ENST00000630016 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
CHD2-219ENST00000630016 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
CHD2-219ENST00000630016 NANOS1Q8WY41 292 aaKnown RBP8.43□□□□□ -1.06
CHD2-219ENST00000630016 AGBL1Q96MI9 1066 aa8.43□□□□□ -1.06
CHD2-219ENST00000630016 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
CHD2-219ENST00000630016 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
CHD2-219ENST00000630016 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
CHD2-219ENST00000630016 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
CHD2-219ENST00000630016 RAB15P59190 212 aa8.42□□□□□ -1.06
CHD2-219ENST00000630016 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
CHD2-219ENST00000630016 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
CHD2-219ENST00000630016 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
CHD2-219ENST00000630016 CTSOP43234 321 aaPredicted RBP8.41□□□□□ -1.06
CHD2-219ENST00000630016 KRT76Q01546 638 aa8.41□□□□□ -1.06
CHD2-219ENST00000630016 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
CHD2-219ENST00000630016 INSM2Q96T92 566 aaPredicted RBP8.41□□□□□ -1.06
CHD2-219ENST00000630016 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
CHD2-219ENST00000630016 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
CHD2-219ENST00000630016 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
CHD2-219ENST00000630016 ADH1AP07327 375 aa8.4□□□□□ -1.06
CHD2-219ENST00000630016 ZNF784Q8NCA9 323 aaPredicted RBP8.4□□□□□ -1.06
CHD2-219ENST00000630016 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
CHD2-219ENST00000630016 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
CHD2-219ENST00000630016 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
CHD2-219ENST00000630016 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
CHD2-219ENST00000630016 CDC14CA4D256 554 aa8.39□□□□□ -1.07
CHD2-219ENST00000630016 ITGA6P23229 1130 aa8.39□□□□□ -1.07
CHD2-219ENST00000630016 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
CHD2-219ENST00000630016 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
CHD2-219ENST00000630016 RFC5P40937 340 aa8.38□□□□□ -1.07
CHD2-219ENST00000630016 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
CHD2-219ENST00000630016 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
CHD2-219ENST00000630016 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
CHD2-219ENST00000630016 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
CHD2-219ENST00000630016 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
CHD2-219ENST00000630016 VWA5B2Q8N398 1253 aa8.36□□□□□ -1.07
CHD2-219ENST00000630016 ESPNB1AK53 854 aa8.35□□□□□ -1.07
CHD2-219ENST00000630016 PTGIRP43119 386 aa8.35□□□□□ -1.07
CHD2-219ENST00000630016 RNFT1Q5M7Z0 435 aa8.35□□□□□ -1.07
CHD2-219ENST00000630016 FOXD4L5Q5VV16 416 aaPredicted RBP8.35□□□□□ -1.07
CHD2-219ENST00000630016 BCANQ96GW7 911 aa8.35□□□□□ -1.07
CHD2-219ENST00000630016 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
CHD2-219ENST00000630016 LILRA1O75019 489 aa8.34□□□□□ -1.07
CHD2-219ENST00000630016 ADAMTS8Q9UP79 889 aa8.34□□□□□ -1.07
CHD2-219ENST00000630016 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
CHD2-219ENST00000630016 LYSMD3Q7Z3D4 306 aa8.33□□□□□ -1.08
CHD2-219ENST00000630016 TMEM151AQ8N4L1 468 aa8.33□□□□□ -1.08
CHD2-219ENST00000630016 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
CHD2-219ENST00000630016 SENP3-EIF4A1A0A087X0R7 540 aa8.32□□□□□ -1.08
CHD2-219ENST00000630016 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
CHD2-219ENST00000630016 TMEM259Q4ZIN3 620 aa8.32□□□□□ -1.08
CHD2-219ENST00000630016 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
CHD2-219ENST00000630016 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
CHD2-219ENST00000630016 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
CHD2-219ENST00000630016 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
CHD2-219ENST00000630016 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
CHD2-219ENST00000630016 GDF11O95390 407 aa8.3□□□□□ -1.08
CHD2-219ENST00000630016 RASSF7Q02833 373 aa8.3□□□□□ -1.08
CHD2-219ENST00000630016 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
CHD2-219ENST00000630016 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
CHD2-219ENST00000630016 KDF1Q8NAX2 398 aaPredicted RBP8.3□□□□□ -1.08
CHD2-219ENST00000630016 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
CHD2-219ENST00000630016 GSK3AP49840 483 aa8.29□□□□□ -1.08
CHD2-219ENST00000630016 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
CHD2-219ENST00000630016 PRICKLE2Q7Z3G6 844 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms