RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 GDF11O95390 407 aa8.18□□□□□ -1.1
VPS8-228ENST00000628962 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
VPS8-228ENST00000628962 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
VPS8-228ENST00000628962 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
VPS8-228ENST00000628962 SPINT1O43278 529 aa8.17□□□□□ -1.1
VPS8-228ENST00000628962 Q6ZVU0 165 aa8.17□□□□□ -1.1
VPS8-228ENST00000628962 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.1
VPS8-228ENST00000628962 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 FIGNL2A6NMB9 653 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 CBLBQ13191 982 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
VPS8-228ENST00000628962 ZNF385CQ66K41 422 aaPredicted RBP8.16□□□□□ -1.1
VPS8-228ENST00000628962 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
VPS8-228ENST00000628962 RTL5Q5HYW3 569 aaPredicted RBP8.15□□□□□ -1.1
VPS8-228ENST00000628962 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
VPS8-228ENST00000628962 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
VPS8-228ENST00000628962 AK7Q96M32 723 aa8.14□□□□□ -1.11
VPS8-228ENST00000628962 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
VPS8-228ENST00000628962 SLURP2P0DP57 97 aa8.13□□□□□ -1.11
VPS8-228ENST00000628962 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
VPS8-228ENST00000628962 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
VPS8-228ENST00000628962 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
VPS8-228ENST00000628962 ITGA6P23229 1130 aa8.11□□□□□ -1.11
VPS8-228ENST00000628962 PDXDC2PQ6P474 469 aa8.11□□□□□ -1.11
VPS8-228ENST00000628962 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
VPS8-228ENST00000628962 KCTD15Q96SI1 283 aaPredicted RBP8.1□□□□□ -1.11
VPS8-228ENST00000628962 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
VPS8-228ENST00000628962 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
VPS8-228ENST00000628962 CLK2P49760 499 aaKnown RBP8.09□□□□□ -1.11
VPS8-228ENST00000628962 PDE4DQ08499 809 aa8.09□□□□□ -1.11
VPS8-228ENST00000628962 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
VPS8-228ENST00000628962 DNMT3AQ9Y6K1 912 aaPredicted RBP8.09□□□□□ -1.11
VPS8-228ENST00000628962 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
VPS8-228ENST00000628962 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
VPS8-228ENST00000628962 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
VPS8-228ENST00000628962 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
VPS8-228ENST00000628962 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
VPS8-228ENST00000628962 CDC14CA4D256 554 aa8.07□□□□□ -1.12
VPS8-228ENST00000628962 IRS1P35568 1242 aa8.07□□□□□ -1.12
VPS8-228ENST00000628962 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
VPS8-228ENST00000628962 INSM2Q96T92 566 aaPredicted RBP8.07□□□□□ -1.12
VPS8-228ENST00000628962 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
VPS8-228ENST00000628962 RELBQ01201 579 aa8.06□□□□□ -1.12
VPS8-228ENST00000628962 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
VPS8-228ENST00000628962 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
VPS8-228ENST00000628962 IGHA1P01876 353 aa8.05□□□□□ -1.12
VPS8-228ENST00000628962 KANK3Q6NY19 840 aa8.05□□□□□ -1.12
VPS8-228ENST00000628962 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
VPS8-228ENST00000628962 GPAT2Q6NUI2 795 aa8.04□□□□□ -1.12
VPS8-228ENST00000628962 ZBTB33Q86T24 672 aa8.04□□□□□ -1.12
VPS8-228ENST00000628962 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
VPS8-228ENST00000628962 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
VPS8-228ENST00000628962 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
VPS8-228ENST00000628962 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
VPS8-228ENST00000628962 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
VPS8-228ENST00000628962 LYPD4Q6UWN0 246 aa8.03□□□□□ -1.12
VPS8-228ENST00000628962 SCARF2Q96GP6 870 aaPredicted RBP8.03□□□□□ -1.12
VPS8-228ENST00000628962 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
VPS8-228ENST00000628962 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
VPS8-228ENST00000628962 FOXK2Q01167 660 aa8.02□□□□□ -1.13
VPS8-228ENST00000628962 SRSF11Q05519 484 aaKnown RBP8.02□□□□□ -1.13
VPS8-228ENST00000628962 ZNF395Q9H8N7 513 aaPredicted RBP8.02□□□□□ -1.13
VPS8-228ENST00000628962 NR6A1Q15406 480 aa8.01□□□□□ -1.13
VPS8-228ENST00000628962 FOXD4L5Q5VV16 416 aaPredicted RBP8.01□□□□□ -1.13
VPS8-228ENST00000628962 TMPRSS4Q9NRS4 437 aa8.01□□□□□ -1.13
VPS8-228ENST00000628962 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
VPS8-228ENST00000628962 ADH1AP07327 375 aa8□□□□□ -1.13
VPS8-228ENST00000628962 PTK2Q05397 1052 aa8□□□□□ -1.13
VPS8-228ENST00000628962 GAS6Q14393 721 aa8□□□□□ -1.13
VPS8-228ENST00000628962 FBXO31Q5XUX0 539 aaPredicted RBP8□□□□□ -1.13
VPS8-228ENST00000628962 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
VPS8-228ENST00000628962 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
VPS8-228ENST00000628962 ADAM32Q8TC27 787 aa8□□□□□ -1.13
VPS8-228ENST00000628962 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
VPS8-228ENST00000628962 LILRA1O75019 489 aa7.99□□□□□ -1.13
VPS8-228ENST00000628962 CELA2BP08218 269 aaPredicted RBP7.99□□□□□ -1.13
VPS8-228ENST00000628962 ADD1P35611 737 aaKnown RBP7.99□□□□□ -1.13
VPS8-228ENST00000628962 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
VPS8-228ENST00000628962 PTGIRP43119 386 aa7.97□□□□□ -1.13
VPS8-228ENST00000628962 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
VPS8-228ENST00000628962 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
VPS8-228ENST00000628962 SLC24A3Q9HC58 644 aa7.97□□□□□ -1.13
VPS8-228ENST00000628962 ERVH48-1M5A8F1 160 aa7.96□□□□□ -1.14
VPS8-228ENST00000628962 ESPNB1AK53 854 aa7.95□□□□□ -1.14
VPS8-228ENST00000628962 PPP2R2DQ66LE6 453 aa7.95□□□□□ -1.14
VPS8-228ENST00000628962 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS8-228ENST00000628962 RAB15P59190 212 aa7.94□□□□□ -1.14
VPS8-228ENST00000628962 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
VPS8-228ENST00000628962 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
VPS8-228ENST00000628962 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
VPS8-228ENST00000628962 EPS8L1Q8TE68 723 aa7.93□□□□□ -1.14
VPS8-228ENST00000628962 ZNF837Q96EG3 531 aaPredicted RBP7.93□□□□□ -1.14
VPS8-228ENST00000628962 GMCL1Q96IK5 515 aa7.93□□□□□ -1.14
VPS8-228ENST00000628962 MBIPQ9NS73 344 aa7.93□□□□□ -1.14
VPS8-228ENST00000628962 ITGB2P05107 769 aa7.92□□□□□ -1.14
VPS8-228ENST00000628962 PLA2G4EQ3MJ16 856 aa7.92□□□□□ -1.14
VPS8-228ENST00000628962 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
VPS8-228ENST00000628962 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms