RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 DDX27Q96GQ7 796 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 IKBKGQ9Y6K9 419 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 DIAPH2O60879 1101 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 MAP3K10Q02779 954 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 NEK1Q96PY6 1258 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 TMOD2Q9NZR1 351 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 SHROOM4Q9ULL8 1493 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 MARCH6O60337 910 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 AIMP1Q12904 312 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 CCDC92Q53HC0 331 aaPredicted RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 RINLQ6ZS11 566 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 EPB41L2O43491 1005 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 PSMD6Q15008 389 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 DDX11Q96FC9 970 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 MAK16Q9BXY0 300 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 DDX41Q9UJV9 622 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 G3V3G9 751 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 SH3BP5O60239 455 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 SYF2O95926 243 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 HSPA5P11021 654 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 CC2D2BQ6DHV5 1058 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 LUC7L3O95232 432 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 TBC1D8O95759 1140 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 BRD3Q15059 726 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 CEP128Q6ZU80 1094 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 MIER3Q7Z3K6 550 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 PPFIBP1Q86W92 1011 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 SMC1BQ8NDV3 1235 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 SLC26A8Q96RN1 970 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 LSM14BQ9BX40 385 aaKnown RBP4.1□□□□□ -1.75
ATRX-212ENST00000623706 GBP3Q9H0R5 595 aa4.1□□□□□ -1.75
ATRX-212ENST00000623706 ZFYP08048 801 aaPredicted RBP4.09□□□□□ -1.75
ATRX-212ENST00000623706 RAP1GDS1P52306 607 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 CSPP1Q1MSJ5 1256 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 NLRP9Q7RTR0 991 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 PALM2Q8IXS6 379 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 ATP2A3Q93084 1043 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 DRC1Q96MC2 740 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 ATG3Q9NT62 314 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 USH1CQ9Y6N9 552 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 TMEM232C9JQI7 657 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 BUB1BO60566 1050 aaPredicted RBP4.09□□□□□ -1.75
ATRX-212ENST00000623706 SERPINI2O75830 405 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 STMN1P16949 149 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 RFX1P22670 979 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 SFSWAPQ12872 951 aaKnown RBP4.09□□□□□ -1.75
ATRX-212ENST00000623706 BCL2L13Q9BXK5 485 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 DIAPH1O60610 1272 aaKnown RBP4.09□□□□□ -1.75
ATRX-212ENST00000623706 CHGBP05060 677 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 CASQ1P31415 396 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 CTAGE9A4FU28 777 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 MCCP23508 829 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 CCDC158Q5M9N0 1113 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 LRCH2Q5VUJ6 765 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 FAM43AQ8N2R8 423 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 DNAAF4Q8WXU2 420 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATRX-212ENST00000623706 SMC4Q9NTJ3 1288 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 DKK3Q9UBP4 350 aa4.09□□□□□ -1.75
ATRX-212ENST00000623706 HOOK1Q9UJC3 728 aaKnown RBP4.09□□□□□ -1.75
ATRX-212ENST00000623706 CAPN9O14815 690 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 BAG4O95429 457 aaKnown RBP4.09□□□□□ -1.76
ATRX-212ENST00000623706 ATN1P54259 1190 aaPredicted RBP4.09□□□□□ -1.76
ATRX-212ENST00000623706 PDCLQ13371 301 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 ANKRD24Q8TF21 1146 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 FMNL2Q96PY5 1086 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 ZMYND15Q9H091 742 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 SF3B2Q13435 895 aaKnown RBP4.09□□□□□ -1.76
ATRX-212ENST00000623706 CCDC129Q6ZRS4 1044 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 OMA1Q96E52 524 aa4.09□□□□□ -1.76
ATRX-212ENST00000623706 APBB1O00213 710 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 TPD52P55327 224 aaPredicted RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 GRSF1Q12849 480 aaKnown RBP eCLIP4.08□□□□□ -1.76
ATRX-212ENST00000623706 MCM6Q14566 821 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 PDCD2Q16342 344 aaPredicted RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 CXorf38Q8TB03 319 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 ODF2LQ9ULJ1 636 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 BECN2A8MW95 431 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 LIG1P18858 919 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 CTNNBL1Q8WYA6 563 aaPredicted RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 SELENOSQ9BQE4 189 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 SPECC1L-ADORA2AF8WAN1 911 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 H0YC42 278 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 CAPN15O75808 1086 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 CCDC27Q2M243 656 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 TTC31Q49AM3 519 aaPredicted RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 CTAGE6Q86UF2 777 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 TRIM34Q9BYJ4 488 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 ESF1Q9H501 851 aaKnown RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 SPATS2LQ9NUQ6 558 aaKnown RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.08□□□□□ -1.76
ATRX-212ENST00000623706 SATB1Q01826 763 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 RNF20Q5VTR2 975 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 CCDC73Q6ZRK6 1079 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 TTC16Q8NEE8 873 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 FAM107BQ9H098 131 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 CLEC11AQ9Y240 323 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 FRMD4BQ9Y2L6 1034 aa4.08□□□□□ -1.76
ATRX-212ENST00000623706 TMED1Q13445 227 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms