RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 KCNQ2O43526 872 aa31.56■■■□□ 2.64
SRRT-218ENST00000620394 EVC2Q86UK5 1308 aa31.55■■■□□ 2.64
SRRT-218ENST00000620394 SBNO2Q9Y2G9 1366 aa31.53■■■□□ 2.64
SRRT-218ENST00000620394 ZBTB7CA1YPR0 619 aa31.51■■■□□ 2.63
SRRT-218ENST00000620394 PLSCR1O15162 318 aa31.51■■■□□ 2.63
SRRT-218ENST00000620394 DDB1Q16531 1140 aa31.51■■■□□ 2.63
SRRT-218ENST00000620394 CABP1Q9NZU7 370 aa31.51■■■□□ 2.63
SRRT-218ENST00000620394 DCAF8L1A6NGE4 600 aa31.5■■■□□ 2.63
SRRT-218ENST00000620394 NLRP6P59044 892 aa31.49■■■□□ 2.63
SRRT-218ENST00000620394 BCL9O00512 1426 aa31.49■■■□□ 2.63
SRRT-218ENST00000620394 CPSF1Q10570 1443 aaKnown RBP31.49■■■□□ 2.63
SRRT-218ENST00000620394 TOM1L2Q6ZVM7 507 aa31.48■■■□□ 2.63
SRRT-218ENST00000620394 BCL11BQ9C0K0 894 aaPredicted RBP31.46■■■□□ 2.63
SRRT-218ENST00000620394 WDR17Q8IZU2 1322 aa31.46■■■□□ 2.63
SRRT-218ENST00000620394 CDCA7Q9BWT1 371 aaPredicted RBP31.45■■■□□ 2.63
SRRT-218ENST00000620394 ANO8Q9HCE9 1232 aaPredicted RBP31.45■■■□□ 2.63
SRRT-218ENST00000620394 RGPD5Q99666 1765 aa31.45■■■□□ 2.62
SRRT-218ENST00000620394 MON2Q7Z3U7 1717 aa31.44■■■□□ 2.62
SRRT-218ENST00000620394 TONSLQ96HA7 1378 aa31.43■■■□□ 2.62
SRRT-218ENST00000620394 MYOM1P52179 1685 aa31.43■■■□□ 2.62
SRRT-218ENST00000620394 ABCC6O95255 1503 aa31.41■■■□□ 2.62
SRRT-218ENST00000620394 USP54Q70EL1 1684 aa31.38■■■□□ 2.61
SRRT-218ENST00000620394 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
SRRT-218ENST00000620394 MARCH10Q8NA82 808 aaPredicted RBP31.37■■■□□ 2.61
SRRT-218ENST00000620394 AXIN2Q9Y2T1 843 aa31.37■■■□□ 2.61
SRRT-218ENST00000620394 NFAT5O94916 1531 aa31.36■■■□□ 2.61
SRRT-218ENST00000620394 KCNH5Q8NCM2 988 aa31.36■■■□□ 2.61
SRRT-218ENST00000620394 ZNF692Q9BU19 519 aaPredicted RBP31.36■■■□□ 2.61
SRRT-218ENST00000620394 CARD11Q9BXL7 1154 aa31.36■■■□□ 2.61
SRRT-218ENST00000620394 NHSQ6T4R5 1651 aa31.35■■■□□ 2.61
SRRT-218ENST00000620394 PTF1AQ7RTS3 328 aa31.35■■■□□ 2.61
SRRT-218ENST00000620394 ARHGEF25Q86VW2 580 aa31.35■■■□□ 2.61
SRRT-218ENST00000620394 TNS2Q63HR2 1409 aa31.34■■■□□ 2.61
SRRT-218ENST00000620394 TTC21BQ7Z4L5 1316 aa31.34■■■□□ 2.61
SRRT-218ENST00000620394 TTC21AQ8NDW8 1320 aa31.33■■■□□ 2.61
SRRT-218ENST00000620394 CARD10Q9BWT7 1032 aa31.33■■■□□ 2.61
SRRT-218ENST00000620394 CCDC7Q96M83 1385 aa31.32■■■□□ 2.6
SRRT-218ENST00000620394 CD163L1Q9NR16 1453 aa31.32■■■□□ 2.6
SRRT-218ENST00000620394 CSB-PGBD3P0DP91 1061 aa31.31■■■□□ 2.6
SRRT-218ENST00000620394 PROM2Q8N271 834 aa31.31■■■□□ 2.6
SRRT-218ENST00000620394 ZBTB7AO95365 584 aa31.29■■■□□ 2.6
SRRT-218ENST00000620394 PDGFDQ9GZP0 370 aaPredicted RBP31.29■■■□□ 2.6
SRRT-218ENST00000620394 STK32BQ9NY57 414 aa31.29■■■□□ 2.6
SRRT-218ENST00000620394 KTN1Q86UP2 1357 aaKnown RBP31.29■■■□□ 2.6
SRRT-218ENST00000620394 TXNRD1Q16881 649 aa31.28■■■□□ 2.6
SRRT-218ENST00000620394 PTGER2P43116 358 aa31.27■■■□□ 2.6
SRRT-218ENST00000620394 PAPPAQ13219 1627 aa31.25■■■□□ 2.59
SRRT-218ENST00000620394 EXOC5O00471 708 aa31.25■■■□□ 2.59
SRRT-218ENST00000620394 SOX12O15370 315 aa31.25■■■□□ 2.59
SRRT-218ENST00000620394 SLC15A2Q16348 729 aa31.24■■■□□ 2.59
SRRT-218ENST00000620394 LTN1O94822 1766 aa31.23■■■□□ 2.59
SRRT-218ENST00000620394 USP31Q70CQ4 1352 aa31.22■■■□□ 2.59
SRRT-218ENST00000620394 PUS7Q96PZ0 661 aaKnown RBP31.21■■■□□ 2.59
SRRT-218ENST00000620394 MTFR1LQ9H019 292 aa31.21■■■□□ 2.59
SRRT-218ENST00000620394 CHD4Q14839 1912 aa31.21■■■□□ 2.59
SRRT-218ENST00000620394 ATF5Q9Y2D1 282 aaPredicted RBP31.2■■■□□ 2.59
SRRT-218ENST00000620394 BTAF1O14981 1849 aa31.19■■■□□ 2.58
SRRT-218ENST00000620394 EDC4Q6P2E9 1401 aaKnown RBP31.18■■■□□ 2.58
SRRT-218ENST00000620394 FHDC1Q9C0D6 1143 aaPredicted RBP31.17■■■□□ 2.58
SRRT-218ENST00000620394 TESK2Q96S53 571 aa31.16■■■□□ 2.58
SRRT-218ENST00000620394 ERBB3P21860 1342 aa31.16■■■□□ 2.58
SRRT-218ENST00000620394 SYT17Q9BSW7 474 aa31.15■■■□□ 2.58
SRRT-218ENST00000620394 A0A1W2PP64 1363 aa31.15■■■□□ 2.58
SRRT-218ENST00000620394 SGIP1Q9BQI5 828 aa31.14■■■□□ 2.58
SRRT-218ENST00000620394 ZNF784Q8NCA9 323 aaPredicted RBP31.13■■■□□ 2.57
SRRT-218ENST00000620394 SLC12A5Q9H2X9 1139 aa31.12■■■□□ 2.57
SRRT-218ENST00000620394 QSER1Q2KHR3 1735 aa31.11■■■□□ 2.57
SRRT-218ENST00000620394 HDGFL2Q7Z4V5 671 aaPredicted RBP31.11■■■□□ 2.57
SRRT-218ENST00000620394 MAP3K5Q99683 1374 aa31.11■■■□□ 2.57
SRRT-218ENST00000620394 FAM208AQ9UK61 1670 aaKnown RBP31.1■■■□□ 2.57
SRRT-218ENST00000620394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.1■■■□□ 2.57
SRRT-218ENST00000620394 TMC1Q8TDI8 760 aa31.1■■■□□ 2.57
SRRT-218ENST00000620394 ST20-MTHFSA0A0A6YYL1 179 aa31.09■■■□□ 2.57
SRRT-218ENST00000620394 IL2RBP14784 551 aa31.09■■■□□ 2.57
SRRT-218ENST00000620394 NME9Q86XW9 330 aa31.09■■■□□ 2.57
SRRT-218ENST00000620394 ACSBG1Q96GR2 724 aa31.09■■■□□ 2.57
SRRT-218ENST00000620394 TERF2IPQ9NYB0 399 aa31.09■■■□□ 2.57
SRRT-218ENST00000620394 NLRP2Q9NX02 1062 aa31.08■■■□□ 2.57
SRRT-218ENST00000620394 SLC24A1O60721 1099 aa31.06■■■□□ 2.56
SRRT-218ENST00000620394 UTRNP46939 3433 aa31.06■■■□□ 2.56
SRRT-218ENST00000620394 ARXQ96QS3 562 aa31.05■■■□□ 2.56
SRRT-218ENST00000620394 KAT6BQ8WYB5 2073 aa31.04■■■□□ 2.56
SRRT-218ENST00000620394 USP47Q96K76 1375 aa31.04■■■□□ 2.56
SRRT-218ENST00000620394 COL24A1Q17RW2 1714 aa31.03■■■□□ 2.56
SRRT-218ENST00000620394 ANKRD24Q8TF21 1146 aa31.01■■■□□ 2.55
SRRT-218ENST00000620394 ZNF827Q17R98 1081 aa31■■■□□ 2.55
SRRT-218ENST00000620394 TUBGCP6Q96RT7 1819 aa30.98■■■□□ 2.55
SRRT-218ENST00000620394 ANKRD36BQ8N2N9 1353 aa30.98■■■□□ 2.55
SRRT-218ENST00000620394 CLSPNQ9HAW4 1339 aa30.98■■■□□ 2.55
SRRT-218ENST00000620394 DOT1LQ8TEK3 1739 aa30.96■■■□□ 2.55
SRRT-218ENST00000620394 LRRC4BQ9NT99 713 aa30.96■■■□□ 2.55
SRRT-218ENST00000620394 SLC27A3Q5K4L6 730 aa30.95■■■□□ 2.55
SRRT-218ENST00000620394 LY75O60449 1722 aa30.94■■■□□ 2.54
SRRT-218ENST00000620394 SLC16A10Q8TF71 515 aa30.94■■■□□ 2.54
SRRT-218ENST00000620394 TIMELESSQ9UNS1 1208 aa30.94■■■□□ 2.54
SRRT-218ENST00000620394 AKT1S1Q96B36 256 aa30.93■■■□□ 2.54
SRRT-218ENST00000620394 SHANK3Q9BYB0 1731 aa30.91■■■□□ 2.54
SRRT-218ENST00000620394 TMF1P82094 1093 aa30.91■■■□□ 2.54
SRRT-218ENST00000620394 SENP3-EIF4A1A0A087X0R7 540 aa30.89■■■□□ 2.54
SRRT-218ENST00000620394 POLD1P28340 1107 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms