RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
NBPF3-213ENST00000619554 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
NBPF3-213ENST00000619554 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
NBPF3-213ENST00000619554 HOXC9P31274 260 aa14.05□□□□□ -0.16
NBPF3-213ENST00000619554 KIF24Q5T7B8 1368 aa14.04□□□□□ -0.16
NBPF3-213ENST00000619554 CSB-PGBD3P0DP91 1061 aa14.04□□□□□ -0.16
NBPF3-213ENST00000619554 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
NBPF3-213ENST00000619554 FLT4P35916 1363 aa14.04□□□□□ -0.16
NBPF3-213ENST00000619554 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
NBPF3-213ENST00000619554 STRN4Q9NRL3 753 aa14.04□□□□□ -0.16
NBPF3-213ENST00000619554 LRP6O75581 1613 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 NFAT5O94916 1531 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
NBPF3-213ENST00000619554 LTV1Q96GA3 475 aaPredicted RBP14.03□□□□□ -0.16
NBPF3-213ENST00000619554 USP21Q9UK80 565 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
NBPF3-213ENST00000619554 AFF2P51816 1311 aa14.02□□□□□ -0.16
NBPF3-213ENST00000619554 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.16
NBPF3-213ENST00000619554 UNC5CLQ8IV45 518 aa14.02□□□□□ -0.16
NBPF3-213ENST00000619554 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
NBPF3-213ENST00000619554 ZNF772Q68DY9 489 aaPredicted RBP14.01□□□□□ -0.17
NBPF3-213ENST00000619554 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
NBPF3-213ENST00000619554 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
NBPF3-213ENST00000619554 SMG6Q86US8 1419 aaKnown RBP14.01□□□□□ -0.17
NBPF3-213ENST00000619554 USP54Q70EL1 1684 aa14□□□□□ -0.17
NBPF3-213ENST00000619554 BLMP54132 1417 aaPredicted RBP14□□□□□ -0.17
NBPF3-213ENST00000619554 TOM1L2Q6ZVM7 507 aa14□□□□□ -0.17
NBPF3-213ENST00000619554 INSRP06213 1382 aa14□□□□□ -0.17
NBPF3-213ENST00000619554 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
NBPF3-213ENST00000619554 NLRP2Q9NX02 1062 aa13.99□□□□□ -0.17
NBPF3-213ENST00000619554 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
NBPF3-213ENST00000619554 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
NBPF3-213ENST00000619554 TRPC5Q9UL62 973 aaPredicted RBP13.99□□□□□ -0.17
NBPF3-213ENST00000619554 ERBB3P21860 1342 aa13.98□□□□□ -0.17
NBPF3-213ENST00000619554 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
NBPF3-213ENST00000619554 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
NBPF3-213ENST00000619554 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
NBPF3-213ENST00000619554 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
NBPF3-213ENST00000619554 SLIT2O94813 1529 aa13.97□□□□□ -0.17
NBPF3-213ENST00000619554 EIF4A2Q14240 407 aaKnown RBP13.97□□□□□ -0.17
NBPF3-213ENST00000619554 VPS72Q15906 364 aa13.97□□□□□ -0.17
NBPF3-213ENST00000619554 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
NBPF3-213ENST00000619554 ABCC6O95255 1503 aa13.96□□□□□ -0.17
NBPF3-213ENST00000619554 ANKRD26Q9UPS8 1709 aa13.96□□□□□ -0.18
NBPF3-213ENST00000619554 MARF1Q9Y4F3 1742 aaKnown RBP13.96□□□□□ -0.18
NBPF3-213ENST00000619554 CDK12Q9NYV4 1490 aaPredicted RBP13.96□□□□□ -0.18
NBPF3-213ENST00000619554 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.18
NBPF3-213ENST00000619554 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
NBPF3-213ENST00000619554 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
NBPF3-213ENST00000619554 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
NBPF3-213ENST00000619554 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
NBPF3-213ENST00000619554 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
NBPF3-213ENST00000619554 IL13P35225 146 aa13.94□□□□□ -0.18
NBPF3-213ENST00000619554 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
NBPF3-213ENST00000619554 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
NBPF3-213ENST00000619554 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
NBPF3-213ENST00000619554 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
NBPF3-213ENST00000619554 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
NBPF3-213ENST00000619554 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
NBPF3-213ENST00000619554 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
NBPF3-213ENST00000619554 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
NBPF3-213ENST00000619554 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
NBPF3-213ENST00000619554 CRB1P82279 1406 aa13.93□□□□□ -0.18
NBPF3-213ENST00000619554 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
NBPF3-213ENST00000619554 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
NBPF3-213ENST00000619554 EYA1Q99502 592 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
NBPF3-213ENST00000619554 SPATA31A5Q5VU36 1347 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 SPATA31A7Q8IWB4 1347 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 A0A0G2JS52 829 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 RXRBP28702 533 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
NBPF3-213ENST00000619554 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
NBPF3-213ENST00000619554 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
NBPF3-213ENST00000619554 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
NBPF3-213ENST00000619554 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
NBPF3-213ENST00000619554 ATRNO75882 1429 aa13.9□□□□□ -0.18
NBPF3-213ENST00000619554 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
NBPF3-213ENST00000619554 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
NBPF3-213ENST00000619554 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
NBPF3-213ENST00000619554 LMO7Q8WWI1 1683 aa13.89□□□□□ -0.19
NBPF3-213ENST00000619554 IGSF1Q8N6C5 1336 aa13.89□□□□□ -0.19
NBPF3-213ENST00000619554 NEFMP07197 916 aa13.89□□□□□ -0.19
NBPF3-213ENST00000619554 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
NBPF3-213ENST00000619554 MAP2P11137 1827 aaKnown RBP13.89□□□□□ -0.19
NBPF3-213ENST00000619554 LTN1O94822 1766 aa13.89□□□□□ -0.19
NBPF3-213ENST00000619554 HMOX1P09601 288 aa13.88□□□□□ -0.19
NBPF3-213ENST00000619554 IL2RBP14784 551 aa13.88□□□□□ -0.19
NBPF3-213ENST00000619554 TATP17735 454 aaPredicted RBP13.88□□□□□ -0.19
NBPF3-213ENST00000619554 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
NBPF3-213ENST00000619554 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
NBPF3-213ENST00000619554 MSH5O43196 834 aa13.87□□□□□ -0.19
NBPF3-213ENST00000619554 COL18A1P39060 1754 aa13.87□□□□□ -0.19
NBPF3-213ENST00000619554 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
NBPF3-213ENST00000619554 FCHSD2O94868 740 aa13.87□□□□□ -0.19
NBPF3-213ENST00000619554 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
NBPF3-213ENST00000619554 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
NBPF3-213ENST00000619554 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms