RNA–Protein interactions for RNA: ENST00000619192.4

PMPCA-209, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-209ENST00000619192 SPATA31A7Q8IWB4 1347 aa29.54■■■□□ 2.32
PMPCA-209ENST00000619192 ONECUT3O60422 494 aaPredicted RBP29.54■■■□□ 2.32
PMPCA-209ENST00000619192 RGPD5Q99666 1765 aa29.54■■■□□ 2.32
PMPCA-209ENST00000619192 AXIN2Q9Y2T1 843 aa29.53■■■□□ 2.32
PMPCA-209ENST00000619192 NSD2O96028 1365 aa29.52■■■□□ 2.32
PMPCA-209ENST00000619192 SOX12O15370 315 aa29.5■■■□□ 2.31
PMPCA-209ENST00000619192 SPATA31A1Q5TZJ5 1347 aa29.49■■■□□ 2.31
PMPCA-209ENST00000619192 THSD7AQ9UPZ6 1657 aa29.49■■■□□ 2.31
PMPCA-209ENST00000619192 BLMP54132 1417 aaPredicted RBP29.48■■■□□ 2.31
PMPCA-209ENST00000619192 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
PMPCA-209ENST00000619192 CRB1P82279 1406 aa29.47■■■□□ 2.31
PMPCA-209ENST00000619192 RTL1A6NKG5 1358 aa29.47■■■□□ 2.31
PMPCA-209ENST00000619192 KIF24Q5T7B8 1368 aa29.47■■■□□ 2.31
PMPCA-209ENST00000619192 MAP3K19Q56UN5 1328 aa29.46■■■□□ 2.31
PMPCA-209ENST00000619192 LARP1Q6PKG0 1096 aaKnown RBP29.46■■■□□ 2.31
PMPCA-209ENST00000619192 WDR17Q8IZU2 1322 aa29.45■■■□□ 2.31
PMPCA-209ENST00000619192 SOCS7O14512 581 aa29.45■■■□□ 2.31
PMPCA-209ENST00000619192 IP6K1Q92551 441 aa29.44■■■□□ 2.3
PMPCA-209ENST00000619192 STRN4Q9NRL3 753 aa29.44■■■□□ 2.3
PMPCA-209ENST00000619192 EVA1CP58658 441 aa29.43■■■□□ 2.3
PMPCA-209ENST00000619192 AMER1Q5JTC6 1135 aaPredicted RBP29.43■■■□□ 2.3
PMPCA-209ENST00000619192 ERBB3P21860 1342 aa29.43■■■□□ 2.3
PMPCA-209ENST00000619192 PEAK1Q9H792 1746 aa29.42■■■□□ 2.3
PMPCA-209ENST00000619192 ZBTB7CA1YPR0 619 aa29.42■■■□□ 2.3
PMPCA-209ENST00000619192 NPC1L1Q9UHC9 1359 aa29.41■■■□□ 2.3
PMPCA-209ENST00000619192 FAM208AQ9UK61 1670 aaKnown RBP29.41■■■□□ 2.3
PMPCA-209ENST00000619192 BRWD3Q6RI45 1802 aa29.41■■■□□ 2.3
PMPCA-209ENST00000619192 FBLN1P23142 703 aa29.41■■■□□ 2.3
PMPCA-209ENST00000619192 BARGINQ6ZT62 677 aa29.41■■■□□ 2.3
PMPCA-209ENST00000619192 CCDC9Q9Y3X0 531 aaKnown RBP29.41■■■□□ 2.3
PMPCA-209ENST00000619192 KNSTRNQ9Y448 316 aa29.41■■■□□ 2.3
PMPCA-209ENST00000619192 THRAP3Q9Y2W1 955 aaKnown RBP29.4■■■□□ 2.3
PMPCA-209ENST00000619192 WNK3Q9BYP7 1800 aa29.4■■■□□ 2.3
PMPCA-209ENST00000619192 EP400Q96L91 3159 aa29.4■■■□□ 2.3
PMPCA-209ENST00000619192 MAP2P11137 1827 aaKnown RBP29.38■■■□□ 2.29
PMPCA-209ENST00000619192 HOXC9P31274 260 aa29.38■■■□□ 2.29
PMPCA-209ENST00000619192 TCP11L2Q8N4U5 519 aa29.37■■■□□ 2.29
PMPCA-209ENST00000619192 PARP4Q9UKK3 1724 aaKnown RBP29.37■■■□□ 2.29
PMPCA-209ENST00000619192 RRS1Q15050 365 aaKnown RBP29.36■■■□□ 2.29
PMPCA-209ENST00000619192 FAM98CQ17RN3 349 aaKnown RBP29.36■■■□□ 2.29
PMPCA-209ENST00000619192 SEPT12Q8IYM1 358 aa29.36■■■□□ 2.29
PMPCA-209ENST00000619192 CARD10Q9BWT7 1032 aa29.36■■■□□ 2.29
PMPCA-209ENST00000619192 FLT4P35916 1363 aa29.36■■■□□ 2.29
PMPCA-209ENST00000619192 SMG6Q86US8 1419 aaKnown RBP29.36■■■□□ 2.29
PMPCA-209ENST00000619192 INSRP06213 1382 aa29.34■■■□□ 2.29
PMPCA-209ENST00000619192 DISP2A7MBM2 1401 aa29.33■■■□□ 2.29
PMPCA-209ENST00000619192 AMPHP49418 695 aa29.32■■■□□ 2.28
PMPCA-209ENST00000619192 TOM1L2Q6ZVM7 507 aa29.32■■■□□ 2.28
PMPCA-209ENST00000619192 ANKRD24Q8TF21 1146 aa29.32■■■□□ 2.28
PMPCA-209ENST00000619192 POLKQ9UBT6 870 aa29.31■■■□□ 2.28
PMPCA-209ENST00000619192 EMILIN1Q9Y6C2 1016 aa29.3■■■□□ 2.28
PMPCA-209ENST00000619192 USP35Q9P2H5 1018 aa29.28■■■□□ 2.28
PMPCA-209ENST00000619192 LRRC37A3O60309 1634 aa29.27■■■□□ 2.28
PMPCA-209ENST00000619192 CSB-PGBD3P0DP91 1061 aa29.27■■■□□ 2.28
PMPCA-209ENST00000619192 MORC1Q86VD1 984 aa29.26■■■□□ 2.27
PMPCA-209ENST00000619192 RGPD2P0DJD1 1756 aa29.26■■■□□ 2.27
PMPCA-209ENST00000619192 HSP90AB2PQ58FF8 381 aa29.25■■■□□ 2.27
PMPCA-209ENST00000619192 CDCA7Q9BWT1 371 aaPredicted RBP29.25■■■□□ 2.27
PMPCA-209ENST00000619192 NCAPD2Q15021 1401 aa29.24■■■□□ 2.27
PMPCA-209ENST00000619192 KRT27Q7Z3Y8 459 aa29.24■■■□□ 2.27
PMPCA-209ENST00000619192 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
PMPCA-209ENST00000619192 UPF1Q92900 1129 aaKnown RBP eCLIP29.2■■■□□ 2.26
PMPCA-209ENST00000619192 TNNT2P45379 298 aaPredicted RBP29.19■■■□□ 2.26
PMPCA-209ENST00000619192 A0A0G2JS52 829 aa29.17■■■□□ 2.26
PMPCA-209ENST00000619192 MYT1Q01538 1121 aa29.17■■■□□ 2.26
PMPCA-209ENST00000619192 LTV1Q96GA3 475 aaPredicted RBP29.17■■■□□ 2.26
PMPCA-209ENST00000619192 TNS2Q63HR2 1409 aa29.17■■■□□ 2.26
PMPCA-209ENST00000619192 CC2D1BQ5T0F9 858 aaKnown RBP29.16■■■□□ 2.26
PMPCA-209ENST00000619192 NBPF6Q5VWK0 638 aa29.16■■■□□ 2.26
PMPCA-209ENST00000619192 NBPF4Q96M43 638 aa29.16■■■□□ 2.26
PMPCA-209ENST00000619192 BCL9O00512 1426 aa29.13■■■□□ 2.25
PMPCA-209ENST00000619192 IL2RBP14784 551 aa29.13■■■□□ 2.25
PMPCA-209ENST00000619192 PPM1GO15355 546 aaPredicted RBP29.12■■■□□ 2.25
PMPCA-209ENST00000619192 DDB1Q16531 1140 aa29.12■■■□□ 2.25
PMPCA-209ENST00000619192 RGPD1P0DJD0 1748 aa29.11■■■□□ 2.25
PMPCA-209ENST00000619192 MEGF6O75095 1541 aa29.1■■■□□ 2.25
PMPCA-209ENST00000619192 PDE3BQ13370 1112 aa29.1■■■□□ 2.25
PMPCA-209ENST00000619192 EIF4A2Q14240 407 aaKnown RBP29.1■■■□□ 2.25
PMPCA-209ENST00000619192 CCDC125Q86Z20 511 aa29.09■■■□□ 2.25
PMPCA-209ENST00000619192 OVOS2A0A0G2JMS6 1433 aa29.09■■■□□ 2.25
PMPCA-209ENST00000619192 SHANK3Q9BYB0 1731 aa29.08■■■□□ 2.25
PMPCA-209ENST00000619192 PLEKHG2Q9H7P9 1386 aa29.08■■■□□ 2.25
PMPCA-209ENST00000619192 EYA1Q99502 592 aa29.07■■■□□ 2.24
PMPCA-209ENST00000619192 COL3A1P02461 1466 aaPredicted RBP29.06■■■□□ 2.24
PMPCA-209ENST00000619192 PARD3Q8TEW0 1356 aa29.06■■■□□ 2.24
PMPCA-209ENST00000619192 IGSF1Q8N6C5 1336 aa29.06■■■□□ 2.24
PMPCA-209ENST00000619192 MTHFSP49914 203 aa29.06■■■□□ 2.24
PMPCA-209ENST00000619192 FAM196AQ6ZSG2 479 aa29.06■■■□□ 2.24
PMPCA-209ENST00000619192 EXOC5O00471 708 aa29.05■■■□□ 2.24
PMPCA-209ENST00000619192 MARCH10Q8NA82 808 aaPredicted RBP29.05■■■□□ 2.24
PMPCA-209ENST00000619192 SBF2Q86WG5 1849 aa29.05■■■□□ 2.24
PMPCA-209ENST00000619192 TNS1Q9HBL0 1735 aaKnown RBP29.05■■■□□ 2.24
PMPCA-209ENST00000619192 PKD1L3Q7Z443 1732 aa29.04■■■□□ 2.24
PMPCA-209ENST00000619192 DDX10Q13206 875 aaKnown RBP29.04■■■□□ 2.24
PMPCA-209ENST00000619192 FAM182BQ5T319 152 aa29.04■■■□□ 2.24
PMPCA-209ENST00000619192 USHBP1Q8N6Y0 703 aa29.03■■■□□ 2.24
PMPCA-209ENST00000619192 IL13P35225 146 aa29.02■■■□□ 2.24
PMPCA-209ENST00000619192 KDRP35968 1356 aa29■■■□□ 2.23
PMPCA-209ENST00000619192 ZNF316A6NFI3 1004 aaPredicted RBP28.98■■■□□ 2.23
PMPCA-209ENST00000619192 PPP2R1AP30153 589 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms