RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KIF7Q2M1P5 1343 aa11.46□□□□□ -0.57
NEK3-209ENST00000618856 KIF20BQ96Q89 1820 aa11.45□□□□□ -0.58
NEK3-209ENST00000618856 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
NEK3-209ENST00000618856 CRB1P82279 1406 aa11.44□□□□□ -0.58
NEK3-209ENST00000618856 LTN1O94822 1766 aa11.44□□□□□ -0.58
NEK3-209ENST00000618856 LARP1Q6PKG0 1096 aaKnown RBP11.44□□□□□ -0.58
NEK3-209ENST00000618856 COG3Q96JB2 828 aa11.44□□□□□ -0.58
NEK3-209ENST00000618856 THRAP3Q9Y2W1 955 aaKnown RBP11.44□□□□□ -0.58
NEK3-209ENST00000618856 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
NEK3-209ENST00000618856 SEPT12Q8IYM1 358 aa11.43□□□□□ -0.58
NEK3-209ENST00000618856 GGNBP2Q9H3C7 697 aa11.43□□□□□ -0.58
NEK3-209ENST00000618856 PANK3Q9H999 370 aa11.43□□□□□ -0.58
NEK3-209ENST00000618856 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
NEK3-209ENST00000618856 BRWD3Q6RI45 1802 aa11.42□□□□□ -0.58
NEK3-209ENST00000618856 WASHC2AQ641Q2 1341 aa11.42□□□□□ -0.58
NEK3-209ENST00000618856 RGPD5Q99666 1765 aa11.42□□□□□ -0.58
NEK3-209ENST00000618856 IP6K1Q92551 441 aa11.42□□□□□ -0.58
NEK3-209ENST00000618856 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
NEK3-209ENST00000618856 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 ERBB3P21860 1342 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 ANKRD26Q9UPS8 1709 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
NEK3-209ENST00000618856 EVA1CP58658 441 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
NEK3-209ENST00000618856 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEK3-209ENST00000618856 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 NSD2O96028 1365 aa11.41□□□□□ -0.58
NEK3-209ENST00000618856 PARP4Q9UKK3 1724 aaKnown RBP11.4□□□□□ -0.58
NEK3-209ENST00000618856 SOX12O15370 315 aa11.4□□□□□ -0.58
NEK3-209ENST00000618856 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
NEK3-209ENST00000618856 CCDC9Q9Y3X0 531 aaKnown RBP11.4□□□□□ -0.58
NEK3-209ENST00000618856 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
NEK3-209ENST00000618856 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
NEK3-209ENST00000618856 FBLN1P23142 703 aa11.39□□□□□ -0.59
NEK3-209ENST00000618856 HOXC9P31274 260 aa11.39□□□□□ -0.59
NEK3-209ENST00000618856 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
NEK3-209ENST00000618856 PEAK1Q9H792 1746 aa11.39□□□□□ -0.59
NEK3-209ENST00000618856 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
NEK3-209ENST00000618856 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
NEK3-209ENST00000618856 SMG6Q86US8 1419 aaKnown RBP11.37□□□□□ -0.59
NEK3-209ENST00000618856 ANKRD24Q8TF21 1146 aa11.37□□□□□ -0.59
NEK3-209ENST00000618856 POLR3GLQ9BT43 218 aa11.37□□□□□ -0.59
NEK3-209ENST00000618856 INSRP06213 1382 aa11.37□□□□□ -0.59
NEK3-209ENST00000618856 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
NEK3-209ENST00000618856 LRRC37A3O60309 1634 aa11.36□□□□□ -0.59
NEK3-209ENST00000618856 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
NEK3-209ENST00000618856 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
NEK3-209ENST00000618856 TOM1L2Q6ZVM7 507 aa11.36□□□□□ -0.59
NEK3-209ENST00000618856 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
NEK3-209ENST00000618856 CDCA7Q9BWT1 371 aaPredicted RBP11.36□□□□□ -0.59
NEK3-209ENST00000618856 FLT4P35916 1363 aa11.36□□□□□ -0.59
NEK3-209ENST00000618856 BCL9O00512 1426 aa11.35□□□□□ -0.59
NEK3-209ENST00000618856 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
NEK3-209ENST00000618856 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
NEK3-209ENST00000618856 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
NEK3-209ENST00000618856 KNSTRNQ9Y448 316 aa11.34□□□□□ -0.59
NEK3-209ENST00000618856 AMPHP49418 695 aa11.33□□□□□ -0.6
NEK3-209ENST00000618856 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
NEK3-209ENST00000618856 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
NEK3-209ENST00000618856 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
NEK3-209ENST00000618856 CSB-PGBD3P0DP91 1061 aa11.32□□□□□ -0.6
NEK3-209ENST00000618856 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
NEK3-209ENST00000618856 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
NEK3-209ENST00000618856 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
NEK3-209ENST00000618856 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
NEK3-209ENST00000618856 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
NEK3-209ENST00000618856 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
NEK3-209ENST00000618856 IL2RBP14784 551 aa11.3□□□□□ -0.6
NEK3-209ENST00000618856 DDB1Q16531 1140 aa11.3□□□□□ -0.6
NEK3-209ENST00000618856 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
NEK3-209ENST00000618856 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
NEK3-209ENST00000618856 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
NEK3-209ENST00000618856 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 A0A0G2JS52 829 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 MYT1Q01538 1121 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 PDE3BQ13370 1112 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 MEGF6O75095 1541 aa11.29□□□□□ -0.6
NEK3-209ENST00000618856 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
NEK3-209ENST00000618856 EXOC5O00471 708 aa11.28□□□□□ -0.6
NEK3-209ENST00000618856 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
NEK3-209ENST00000618856 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
NEK3-209ENST00000618856 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
NEK3-209ENST00000618856 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
NEK3-209ENST00000618856 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
NEK3-209ENST00000618856 EYA1Q99502 592 aa11.26□□□□□ -0.61
NEK3-209ENST00000618856 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
NEK3-209ENST00000618856 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
NEK3-209ENST00000618856 RGPD3A6NKT7 1758 aaPredicted RBP11.24□□□□□ -0.61
NEK3-209ENST00000618856 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
NEK3-209ENST00000618856 IL13P35225 146 aa11.24□□□□□ -0.61
NEK3-209ENST00000618856 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
NEK3-209ENST00000618856 KDRP35968 1356 aa11.24□□□□□ -0.61
NEK3-209ENST00000618856 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms