RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 NCOA3Q9Y6Q9 1424 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 FOXD4Q12950 439 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 SEMA3FQ13275 785 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 MAF1Q9H063 256 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 FANCIQ9NVI1 1328 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 QSER1Q2KHR3 1735 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 CCER2I3L3R5 266 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 ONECUT3O60422 494 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 PHF12Q96QT6 1004 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 FEZ2Q9UHY8 353 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 FARP1Q9Y4F1 1045 aaPredicted RBP5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 ANKRD62A6NC57 917 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 YY1P25490 414 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 SGIP1Q9BQI5 828 aa5.28□□□□□ -1.56
UBE2D3-233ENST00000618836 CTTNBP2Q8WZ74 1663 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 SSFA2P28290 1259 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 ANKRD23Q86SG2 305 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 SMC5Q8IY18 1101 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 BLMP54132 1417 aaPredicted RBP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 LIG1P18858 919 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 APLP1P51693 650 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 DPY19L2Q6NUT2 758 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 SAMD9LQ8IVG5 1584 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 NBPF10Q6P3W6 841 aaKnown RBP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 DNAJC14Q6Y2X3 702 aaPredicted RBP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 AKT1S1Q96B36 256 aa5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 MAGEC2Q9UBF1 373 aaPredicted RBP5.27□□□□□ -1.57
UBE2D3-233ENST00000618836 GOLIM4O00461 696 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 DDX46Q7L014 1031 aaKnown RBP5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 HELBQ8NG08 1087 aaPredicted RBP5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 MORC4Q8TE76 937 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 EMILIN3Q9NT22 766 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 ATRNO75882 1429 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 ITSN2Q9NZM3 1697 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 NKTRP30414 1462 aaKnown RBP5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 MTA1Q13330 715 aa5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 BSDC1Q9NW68 430 aaPredicted RBP5.26□□□□□ -1.57
UBE2D3-233ENST00000618836 HMGB1P1B2RPK0 211 aaPredicted RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 FECHP22830 423 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 ARID4AP29374 1257 aaPredicted RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 CSPP1Q1MSJ5 1256 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 MSL3Q8N5Y2 521 aaKnown RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 SNRNP27Q8WVK2 155 aaKnown RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 DRC1Q96MC2 740 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 LARP6Q9BRS8 491 aaKnown RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 CLTCQ00610 1675 aaKnown RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 HSP90AA2PQ14568 343 aaPredicted RBP5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 ZMYND10O75800 440 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 HSP90AB3PQ58FF7 597 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 YY1AP1Q9H869 796 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 SLIT1O75093 1534 aa5.25□□□□□ -1.57
UBE2D3-233ENST00000618836 RAB11FIP3O75154 756 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 RGS19P49795 217 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 HDAC1Q13547 482 aaPredicted RBP5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 KIDINS220Q9ULH0 1771 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 PRIM1P49642 420 aaKnown RBP5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 SLC20A2Q08357 652 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 FLIIQ13045 1269 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 E2F4Q16254 413 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 MAP3K5Q99683 1374 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 PRKAR2AP13861 404 aaKnown RBP5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 SCP2P22307 547 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 RHBDL3P58872 404 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 PDAP1Q13442 181 aaKnown RBP5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 CXorf38Q8TB03 319 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 CEP126Q9P2H0 1117 aa5.24□□□□□ -1.57
UBE2D3-233ENST00000618836 ZNF280DQ6N043 979 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 ZNF662Q6ZS27 426 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 GPATCH8Q9UKJ3 1502 aaKnown RBP5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 SENP3-EIF4A1A0A087X0R7 540 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 GPR37O15354 613 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 APPP05067 770 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 CC2D1BQ5T0F9 858 aaKnown RBP5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 C8orf37Q96NL8 207 aa5.23□□□□□ -1.57
UBE2D3-233ENST00000618836 RBM47A0AV96 593 aaKnown RBP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 GOLGA6CA6NDK9 693 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 GOLGA6BA6NDN3 693 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 EPB41L2O43491 1005 aaKnown RBP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 GOLGA6DP0CG33 693 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 TCF3P15923 654 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 RGS3P49796 1198 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 CCDC181Q5TID7 509 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 KIF12Q96FN5 646 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 WDR70Q9NW82 654 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 GOLGA6AQ9NYA3 693 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 KIAA1522Q9P206 1035 aaPredicted RBP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 WRNQ14191 1432 aaPredicted RBP eCLIP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 CREB3O43889 395 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 EIF3JO75822 258 aaKnown RBP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 RAPGEF3O95398 923 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 MAP4K4O95819 1239 aaPredicted RBP5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 ARMCX6Q7L4S7 300 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 FAM117AQ9C073 453 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 CRISPLD2Q9H0B8 497 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 EFCAB6Q5THR3 1501 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 UBR1Q8IWV7 1749 aa5.22□□□□□ -1.57
UBE2D3-233ENST00000618836 RPGRIP1LQ68CZ1 1315 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms